RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 OR6B1O95007 311 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 MST1P26927 711 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 CLK3P49761 638 aaKnown RBP23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 ULK3Q6PHR2 472 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 CD300LDQ6UXZ3 194 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 MISPQ8IVT2 679 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 CADM2Q8N3J6 435 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 TMCO5AQ8N6Q1 288 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 GATA6Q92908 595 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 KIAA1143Q96AT1 154 aaPredicted RBP23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 ZNF524Q96C55 264 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 MUS81Q96NY9 551 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 UCK2Q9BZX2 261 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 REV1Q9UBZ9 1251 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 CELSR3Q9NYQ7 3312 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 LIFP15018 202 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 OMPP47874 163 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 CCR4P51679 360 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 ALG10BQ5I7T1 473 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 SWT1Q5T5J6 900 aaKnown RBP23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 OPN5Q6U736 354 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 LINC00114Q6XXX2 140 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 PRICKLE2Q7Z3G6 844 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 IP6K3Q96PC2 410 aa23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 NDRG4Q9ULP0 352 aaKnown RBP23.78■■□□□ 1.4
SCAMP4-210ENST00000588555 AKAP13Q12802 2813 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 DCDC2BA2VCK2 349 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 PIP5K1CO60331 668 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 PTGDSP41222 190 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 SLC6A8P48029 635 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 COPZ1P61923 177 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 NRMQ8IXM6 262 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 PIGXQ8TBF5 258 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 TMEM239Q8WW34 195 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 PSMF1Q92530 271 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 C3orf49Q96BT1 292 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 MPP4Q96JB8 637 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 GALNT9Q9HCQ5 603 aa23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 CHCHD2Q9Y6H1 151 aaPredicted RBP23.77■■□□□ 1.4
SCAMP4-210ENST00000588555 BCKDKO14874 412 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 IFNGR2P38484 337 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 IDH2P48735 452 aaKnown RBP23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 ST13P50502 369 aaKnown RBP23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 SSR4P51571 173 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 KEAP1Q14145 624 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 BICRALQ6AI39 1079 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 WBP2NLQ6ICG8 309 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 RRM2BQ7LG56 351 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 RNF113BQ8IZP6 322 aaKnown RBP23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 DUSP19Q8WTR2 217 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 DNAJA4Q8WW22 397 aaPredicted RBP23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 PITX2Q99697 317 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 RYDENQ9NUL5 291 aaKnown RBP23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 RPS6KB2Q9UBS0 482 aa23.76■■□□□ 1.39
SCAMP4-210ENST00000588555 B4DXG7 233 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 KLF4O43474 513 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 TP53P04637 393 aaPredicted RBP23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 PTNP21246 168 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 GSSP48637 474 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 COX10Q12887 443 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 DCAF10Q5QP82 559 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 ZNF691Q5VV52 312 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 MEX3DQ86XN8 651 aaKnown RBP23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 OR5W2Q8NH69 310 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 RNF217Q8TC41 542 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 BRIX1Q8TDN6 353 aaKnown RBP23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 ASB15Q8WXK1 588 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 ENOPH1Q9UHY7 261 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 DOCK10Q96BY6 2186 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 OSMP13725 252 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 P2RX1P51575 399 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 RPP38P78345 283 aaKnown RBP23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 MYBPC1Q00872 1141 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 KRT80Q6KB66 452 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 IL20RBQ6UXL0 311 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 Q6ZPB1 254 aaPredicted RBP23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 SIRT6Q8N6T7 355 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 GNPDA2Q8TDQ7 276 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 FAM46AQ96IP4 442 aaKnown RBP23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 HRASLS5Q96KN8 279 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 HS6ST2Q96MM7 605 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 CNIH4Q9P003 139 aa23.75■■□□□ 1.39
SCAMP4-210ENST00000588555 RBM34P42696 430 aaKnown RBP23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 CHN2P52757 468 aa23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 ESRRGP62508 458 aa23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 C17orf67Q0P5P2 114 aa23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 TSPAN31Q12999 210 aa23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 IL18R1Q13478 541 aa23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 RAPSNQ13702 412 aa23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 B3GNTL1Q67FW5 361 aaPredicted RBP23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 DND1Q8IYX4 353 aaKnown RBP23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 MEPEQ9NQ76 525 aaPredicted RBP23.74■■□□□ 1.39
SCAMP4-210ENST00000588555 A0A087WUJ7 227 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 C2orf72A6NCS6 295 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 TP53I11O14683 189 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 CHMP24386 653 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 CASP3P42574 277 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 SLC1A3P43003 542 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 TOMM34Q15785 309 aaPredicted RBP23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 JMJD6Q6NYC1 403 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms