RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CLEC9AQ6UXN8 241 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 TFAP2EQ6VUC0 442 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 ZNF704Q6ZNC4 412 aaPredicted RBP12.77□□□□□ -0.37
VMP1-206ENST00000587945 FCRLAQ7L513 359 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 ANKRD46Q86W74 232 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 OR4A15Q8NGL6 344 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 ZFP90Q8TF47 636 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 CPNE4Q96A23 557 aaPredicted RBP12.77□□□□□ -0.37
VMP1-206ENST00000587945 S100PBPQ96BU1 408 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 MRGPRX4Q96LA9 322 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 QRSL1Q9H0R6 528 aaKnown RBP12.77□□□□□ -0.37
VMP1-206ENST00000587945 ASIC5Q9NY37 505 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 KLHL13Q9P2N7 655 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 MKLN1Q9UL63 735 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 GPR52Q9Y2T5 361 aa12.77□□□□□ -0.37
VMP1-206ENST00000587945 NIPBLQ6KC79 2804 aaeCLIP12.77□□□□□ -0.37
VMP1-206ENST00000587945 TRIM64A6NGJ6 449 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 TRIM64BA6NI03 449 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 GJE1A6NN92 205 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 C9JVG2 144 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 SMAD7O15105 426 aaKnown RBP12.76□□□□□ -0.37
VMP1-206ENST00000587945 ZNF264O43296 627 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 GCM2O75603 506 aaPredicted RBP12.76□□□□□ -0.37
VMP1-206ENST00000587945 PRKD3O94806 890 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 SOX30O94993 753 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 CPSF4O95639 269 aaKnown RBP12.76□□□□□ -0.37
VMP1-206ENST00000587945 PSMB1P20618 241 aaKnown RBP12.76□□□□□ -0.37
VMP1-206ENST00000587945 PHC1P78364 1004 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 RNPS1Q15287 305 aaKnown RBP12.76□□□□□ -0.37
VMP1-206ENST00000587945 WDR93Q6P2C0 686 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 BHLHB9Q6PI77 547 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 PLEKHM3Q6ZWE6 761 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 GABRG1Q8N1C3 465 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 ZNF619Q8N2I2 560 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 TOR1AIP2Q8NFQ8 470 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 ZNF775Q96BV0 537 aaPredicted RBP12.76□□□□□ -0.37
VMP1-206ENST00000587945 SLC35G5Q96KT7 338 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 THUMPD3Q9BV44 507 aaKnown RBP12.76□□□□□ -0.37
VMP1-206ENST00000587945 DPY30Q9C005 99 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 NMUR2Q9GZQ4 415 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 OR51I1Q9H343 314 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 FANCFQ9NPI8 374 aa12.76□□□□□ -0.37
VMP1-206ENST00000587945 DUXAA6NLW8 204 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 RNASET2O00584 256 aaKnown RBP12.75□□□□□ -0.37
VMP1-206ENST00000587945 RGS16O15492 202 aaPredicted RBP12.75□□□□□ -0.37
VMP1-206ENST00000587945 EIF4E2O60573 245 aaKnown RBP12.75□□□□□ -0.37
VMP1-206ENST00000587945 BCAS1O75363 584 aaPredicted RBP12.75□□□□□ -0.37
VMP1-206ENST00000587945 STX11O75558 287 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 UGT2B17O75795 530 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 H6PDO95479 791 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 LY6G6DO95868 133 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 C1QCP02747 245 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 YES1P07947 543 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 UBTFL6P0CB48 400 aaPredicted RBP12.75□□□□□ -0.37
VMP1-206ENST00000587945 OR12D1P0DN82 309 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 BGNP21810 368 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 SLC7A1P30825 629 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 PTH2RP49190 550 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 NR1H2P55055 460 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 SELENBP1Q13228 472 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 SKP2Q13309 424 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 CBFBQ13951 182 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 MPP2Q14168 576 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 ZNF141Q15928 474 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 MAPK14Q16539 360 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 SMU1Q2TAY7 513 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 TIGD2Q4W5G0 525 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 SLC25A53Q5H9E4 307 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 TNFAIP8L2Q6P589 184 aaPredicted RBP12.75□□□□□ -0.37
VMP1-206ENST00000587945 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 LSRQ86X29 649 aaPredicted RBP12.75□□□□□ -0.37
VMP1-206ENST00000587945 NAV3Q8IVL0 2385 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 STEAP2Q8NFT2 490 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 OR8J2Q8NGG1 315 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 RAB3IL1Q8TBN0 382 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 IGFBPL1Q8WX77 278 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 RAB8BQ92930 207 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 COX4I2Q96KJ9 171 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 OR5B2Q96R09 309 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 SORT1Q99523 831 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 LAT2Q9GZY6 243 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 ING1Q9UK53 422 aaPredicted RBP12.75□□□□□ -0.37
VMP1-206ENST00000587945 RAP2CQ9Y3L5 183 aa12.75□□□□□ -0.37
VMP1-206ENST00000587945 ZNF814B7Z6K7 855 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 ETV2O00321 342 aaPredicted RBP12.74□□□□□ -0.37
VMP1-206ENST00000587945 BIRC5O15392 142 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 SCN2BO60939 215 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 ADAP00813 363 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 CSTAP01040 98 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 MYZAPP0CAP1 466 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 IL32P24001 234 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 EDNRAP25101 427 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 SLC1A6P48664 564 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 RPL14P50914 215 aaKnown RBP12.74□□□□□ -0.37
VMP1-206ENST00000587945 SESN3P58005 492 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 RAC3P60763 192 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 SFRP5Q5T4F7 317 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 HEPHL1Q6MZM0 1159 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 PRSS57Q6UWY2 283 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms