RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CXXC5Q7LFL8 322 aaKnown RBP12.56□□□□□ -0.4
ERCC1-205ENST00000587888 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.56□□□□□ -0.4
ERCC1-205ENST00000587888 SLC43A2Q8N370 569 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 OR5AK3PQ8NH89 298 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 OR2W6PQ8NHA6 318 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 PIWIL2Q8TC59 973 aaKnown RBP12.56□□□□□ -0.4
ERCC1-205ENST00000587888 ZFP90Q8TF47 636 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 OR5P2Q8WZ92 322 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 PPP3R2Q96LZ3 170 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 MECRQ9BV79 373 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 COQ10BQ9H8M1 238 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 ACTL7BQ9Y614 415 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 PRR14LQ5THK1 2151 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 USF3Q68DE3 2245 aa12.56□□□□□ -0.4
ERCC1-205ENST00000587888 NSD1Q96L73 2696 aaPredicted RBP12.55□□□□□ -0.4
ERCC1-205ENST00000587888 ZNF264O43296 627 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 RAMP1O60894 148 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 NDUFS7O75251 213 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
ERCC1-205ENST00000587888 FESP07332 822 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 PTNP21246 168 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 RPL3P39023 403 aaKnown RBP12.55□□□□□ -0.4
ERCC1-205ENST00000587888 SUMO3P55854 103 aaPredicted RBP12.55□□□□□ -0.4
ERCC1-205ENST00000587888 RAC3P60763 192 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 DMTNQ08495 405 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 RASGEF1BQ0VAM2 473 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 PTGR1Q14914 329 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 QPRTQ15274 297 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 PGGHGQ32M88 737 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 IL23RQ5VWK5 629 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 HEPHL1Q6MZM0 1159 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 TDRPQ86YL5 185 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 KRTCAP2Q8N6L1 136 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 TOR1AIP2Q8NFQ8 470 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 OR56A1Q8NGH5 318 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 OR5D16Q8NGK9 328 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 OR5W2Q8NH69 310 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 MRGPRX4Q96LA9 322 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 C3orf30Q96M34 536 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 OR5B2Q96R09 309 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 OR7D2Q96RA2 312 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 ZNF300Q96RE9 604 aaPredicted RBP12.55□□□□□ -0.4
ERCC1-205ENST00000587888 QRSL1Q9H0R6 528 aaKnown RBP12.55□□□□□ -0.4
ERCC1-205ENST00000587888 SLCO5A1Q9H2Y9 848 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 EML4Q9HC35 981 aaKnown RBP12.55□□□□□ -0.4
ERCC1-205ENST00000587888 GP6Q9HCN6 339 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 ATAD3AQ9NVI7 634 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 GPATCH2Q9NW75 528 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 CISD1Q9NZ45 108 aaKnown RBP12.55□□□□□ -0.4
ERCC1-205ENST00000587888 KLHL9Q9P2J3 617 aa12.55□□□□□ -0.4
ERCC1-205ENST00000587888 ROS1P08922 2347 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 KIF2AO00139 706 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-205ENST00000587888 NPHS1O60500 1241 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 EIF4E2O60573 245 aaKnown RBP12.54□□□□□ -0.4
ERCC1-205ENST00000587888 ADAM11O75078 769 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 IGHV4-39P01824 125 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 KRT16P08779 473 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 UBL4AP11441 157 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 EDNRAP25101 427 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 C21orf58P58505 322 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 RPS26P62854 115 aaKnown RBP12.54□□□□□ -0.4
ERCC1-205ENST00000587888 SELENBP1Q13228 472 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 CBFBQ13951 182 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 PPA1Q15181 289 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 GPR68Q15743 365 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 ETFDHQ16134 617 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 PGS1Q32NB8 556 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 TIGD2Q4W5G0 525 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 C6orf136Q5SQH8 315 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 PDZK1Q5T2W1 519 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 Q6ZT83 130 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 OLIG3Q7RTU3 272 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 ZNF100Q8IYN0 542 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 SPATA3Q8NHX4 192 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 COQ8BQ96D53 544 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 SDF2Q99470 211 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 PRPF18Q99633 342 aaKnown RBP12.54□□□□□ -0.4
ERCC1-205ENST00000587888 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
ERCC1-205ENST00000587888 PSD2Q9BQI7 771 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
ERCC1-205ENST00000587888 POTEKPQ9BYX7 375 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 TRIM2Q9C040 744 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 PPCSQ9HAB8 311 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 BCO1Q9HAY6 547 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 YAE1D1Q9NRH1 226 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 SLC17A7Q9P2U7 560 aa12.54□□□□□ -0.4
ERCC1-205ENST00000587888 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-205ENST00000587888 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-205ENST00000587888 ESPNB1AK53 854 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 NPIPB9F8W1W9 429 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 CD8AP01732 235 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 SOAT1P35610 550 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 OR3A2P47893 321 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 ATP6AP1LQ52LC2 224 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 HMBOX1Q6NT76 420 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 ZCCHC23Q6ZST2 131 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 HOMEZQ8IX15 550 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 CLEC4FQ8N1N0 589 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms