RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 SAMD8Q96LT4 415 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 SMOC1Q9H4F8 434 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 APMAPQ9HDC9 416 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.47■□□□□ 0.874e-8■■■□□ 15.2
CIRBP-208ENST00000586548 VSTM2BA6NLU5 285 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 SURF4O15260 269 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 PRODHO43272 600 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 RCBTB2O95199 551 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 PTHP01270 115 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 HMGN1P05114 100 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 UBL4AP11441 157 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 IL12BP29460 328 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 TGFBR2P37173 567 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 GRK6P43250 576 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 GPR143P51810 404 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 COPZ1P61923 177 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 ANGPT1Q15389 498 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 TIGD6Q17RP2 521 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 TMEM44Q2T9K0 475 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 SLC34A3Q8N130 599 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 TMEM80Q96HE8 168 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 PCDHGB2Q9Y5G2 931 aa20.46■□□□□ 0.87
CIRBP-208ENST00000586548 A0A0C4DFX4 3053 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 KDM4EB2RXH2 506 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-208ENST00000586548 M0R082 166 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 TSPAN2O60636 221 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 ALOX12BO75342 701 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 REM1O75628 298 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 ADRA2AP08913 450 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 NR0B1P51843 470 aaKnown RBP20.45■□□□□ 0.86
CIRBP-208ENST00000586548 ZFP36L1Q07352 338 aaKnown RBP20.45■□□□□ 0.86
CIRBP-208ENST00000586548 SKP2Q13309 424 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 CD226Q15762 336 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 RNLSQ5VYX0 342 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 PHOSPHO1Q8TCT1 267 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 PLEKHA8Q96JA3 519 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 LOXL4Q96JB6 756 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 CCNL2Q96S94 520 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-208ENST00000586548 ADOQ96SZ5 270 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 NRSN2Q9GZP1 204 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 UBQLN3Q9H347 655 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 HHATLQ9HCP6 504 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 TIMMDC1Q9NPL8 285 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 NCOR1O75376 2440 aa20.45■□□□□ 0.86
CIRBP-208ENST00000586548 EFCAB9A8MZ26 197 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 RFPL3O75679 317 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 GP1BAP07359 652 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 FXYD6P3P58550 94 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 PLCXD2Q0VAA5 305 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 PRR22Q8IZ63 422 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 AGBL5Q8NDL9 886 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 METTL21AQ8WXB1 218 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 SEMA4CQ9C0C4 833 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 SLC26A1Q9H2B4 701 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 ARRDC1-AS1Q9H2J1 176 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 MRPS18AQ9NVS2 196 aaKnown RBP20.44■□□□□ 0.86
CIRBP-208ENST00000586548 SIGLEC7Q9Y286 467 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 IRGMA1A4Y4 181 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 SAGE2PA6NJ88 616 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 TMX2-CTNND1H3BSU7 103 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 KHNYNO15037 678 aaKnown RBP20.44■□□□□ 0.86
CIRBP-208ENST00000586548 SLC22A1O15245 554 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 CPNE3O75131 537 aaKnown RBP20.44■□□□□ 0.86
CIRBP-208ENST00000586548 ICOSLGO75144 302 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 NGFRP08138 427 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 CYC1P08574 325 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 SAGP10523 405 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-208ENST00000586548 CD36P16671 472 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 BMP7P18075 431 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 GRK5P34947 590 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 FOXL2P58012 376 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 AQP6Q13520 282 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 KLHL22Q53GT1 634 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 HSDL2Q6YN16 418 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 DBX2Q6ZNG2 339 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 GATSQ8NAP1 163 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 ANKK1Q8NFD2 765 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 TAS2R16Q9NYV7 291 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 GPR52Q9Y2T5 361 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 PCDHGA5Q9Y5G8 931 aa20.44■□□□□ 0.86
CIRBP-208ENST00000586548 MUC3AQ02505 3323 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 HEATR5AQ86XA9 2040 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 A0A087WUJ7 227 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 GTPBP1O00178 669 aaKnown RBP20.43■□□□□ 0.86
CIRBP-208ENST00000586548 ZNF264O43296 627 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 HCN1O60741 890 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 LDOC1O95751 146 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-208ENST00000586548 CH25HO95992 272 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 FUT1P19526 365 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 LIPAP38571 399 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 PNLIPRP2P54317 469 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 EMP2P54851 167 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 DYNC1I2Q13409 638 aaKnown RBP20.43■□□□□ 0.86
CIRBP-208ENST00000586548 SMARCD3Q6STE5 483 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 APOOLQ6UXV4 268 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 SLC43A2Q8N370 569 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 BMPERQ8N8U9 685 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 NFAM1Q8NET5 270 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-208ENST00000586548 OR13C2Q8NGS9 318 aa20.43■□□□□ 0.86
CIRBP-208ENST00000586548 C3orf49Q96BT1 292 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms