RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 RTN4RQ9BZR6 473 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 OR2B2Q9GZK3 357 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 EXOSC3Q9NQT5 275 aaKnown RBP12.58□□□□□ -0.4
TRAF4-215ENST00000584944 MED17Q9NVC6 651 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 RLIMQ9NVW2 624 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 SH3BGRL2Q9UJC5 107 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 BAG5Q9UL15 447 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 SLC9A8Q9Y2E8 581 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 SLC6A5Q9Y345 797 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 GPC6Q9Y625 555 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-215ENST00000584944 CREBBPQ92793 2442 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 POLEQ07864 2286 aa12.58□□□□□ -0.4
TRAF4-215ENST00000584944 CENPVL1A0A0U1RR11 272 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 CDHR4A6H8M9 788 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 WIPF3A6NGB9 483 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 CLDN24A6NM45 220 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 FIGNL2A6NMB9 653 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 GJE1A6NN92 205 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 C17orf51A8MQB3 221 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 H0Y3Z8 333 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 H3BML4 177 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 EBAG9O00559 213 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 ATP5HO75947 161 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 ZNF682O95780 498 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 IGHG3P01860 377 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 OPN1SWP03999 348 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 ZNF17P17021 662 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 RPS4Y1P22090 263 aaKnown RBP12.57□□□□□ -0.4
TRAF4-215ENST00000584944 PGM1P36871 562 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 HTR3AP46098 478 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 GSK3BP49841 420 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 TDGF1P3P51864 188 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 RGS8P57771 180 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-215ENST00000584944 SRYQ05066 204 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 QPRTQ15274 297 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 SPATS1Q496A3 300 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 DNAL1Q4LDG9 190 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 AP1ARQ63HQ0 302 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 POMZP3Q6PJE2 187 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 CBLN3Q6UW01 205 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 CCDC121Q6ZUS5 278 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 CALHM3Q86XJ0 350 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 ARHGAP24Q8N264 748 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 CADM2Q8N3J6 435 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 MEIOBQ8N635 442 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 RBM15BQ8NDT2 890 aaKnown RBP12.57□□□□□ -0.4
TRAF4-215ENST00000584944 ST8SIA1Q92185 356 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 SMPDL3BQ92485 455 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 TPD52L3Q96J77 140 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 PINK1Q9BXM7 581 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 EVA1AQ9H8M9 152 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 ICAM5Q9UMF0 924 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 CAMK2AQ9UQM7 478 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 LIPGQ9Y5X9 500 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 SPIN1Q9Y657 262 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-215ENST00000584944 MYO9AB2RTY4 2548 aa12.57□□□□□ -0.4
TRAF4-215ENST00000584944 A1L4Q6 167 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 CXCR6O00574 342 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 PEPDP12955 493 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 CHMP24386 653 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 IFNA8P32881 189 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 IDH2P48735 452 aaKnown RBP12.56□□□□□ -0.4
TRAF4-215ENST00000584944 EEF1A1P68104 462 aaKnown RBP12.56□□□□□ -0.4
TRAF4-215ENST00000584944 MERTKQ12866 999 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 MAPK11Q15759 364 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 PDSS1Q5T2R2 415 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 ZNF585AQ6P3V2 769 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 DHRS4L2Q6PKH6 230 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 FKBP9P1Q75LS8 142 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 CD163Q86VB7 1156 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 UBQLNLQ8IYU4 475 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 ATP6V1C2Q8NEY4 427 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 OR5M9Q8NGP3 310 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 OR5M1Q8NGP8 315 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 GPR119Q8TDV5 335 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 MCUR1Q96AQ8 359 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 MRGPRX4Q96LA9 322 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 RNF145Q96MT1 663 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 DNAJB12Q9NXW2 375 aaKnown RBP12.56□□□□□ -0.4
TRAF4-215ENST00000584944 TMEM181Q9P2C4 612 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 ABCD2Q9UBJ2 740 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 MAGEL2Q9UJ55 1249 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 RPS6KA6Q9UK32 745 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 NINQ8N4C6 2090 aa12.56□□□□□ -0.4
TRAF4-215ENST00000584944 A0A1B0GVC2 190 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 AP3D1O14617 1153 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 SEC14L5O43304 696 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 OIP5O43482 229 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 ZIC3O60481 467 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 MFN2O95140 757 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 GKN3PP0CG01 181 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 BMP7P18075 431 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 SLC7A1P30825 629 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 KDELR2P33947 212 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 GZMMP51124 257 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 PER3P56645 1201 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 PCBP3P57721 371 aaKnown RBP12.55□□□□□ -0.4
TRAF4-215ENST00000584944 RPS3AP61247 264 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms