RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SETD7Q8WTS6 366 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM172AQ8WUF8 416 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 HSD17B8Q92506 261 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 HIST1H2ACQ93077 130 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 NTNG2Q96CW9 530 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SNRNP40Q96DI7 357 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 DCUN1D1Q96GG9 259 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 MUS81Q96NY9 551 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RHNO1Q9BSD3 238 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 FEM1AQ9BSK4 669 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 GBA3Q9H227 469 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 HSD3B7Q9H2F3 369 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC19Q9H756 370 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 NHEJ1Q9H9Q4 299 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ACOXLQ9NUZ1 547 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 OR12D3Q9UGF7 316 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 DAPK2Q9UIK4 370 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ERRFI1Q9UJM3 462 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PROCRQ9UNN8 238 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A1B0GTQ1 180 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 C5orf51A6NDU8 294 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 A8MVM7 634 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPCL2B2RXH8 293 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 WDR1O75083 606 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ERLIN1O75477 346 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 LRATO95237 230 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PTBP3O95758 552 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 IGHV2-70P01814 119 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 C8GP07360 202 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 DMDP11532 3685 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF7P17097 686 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 KDELR1P24390 212 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 MPZP25189 248 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 FOXN2P32314 431 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ALDH3B1P43353 468 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC7A2P52569 658 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 AP1S2P56377 157 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 RPS14P62263 151 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 MRPS22P82650 360 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 LTBQ06643 244 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ILF3Q12906 894 aaKnown RBP eCLIP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CAMK4Q16566 473 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TATDN3Q17R31 274 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PTPN20Q4JDL3 420 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC35D3Q5M8T2 416 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 STXBP5Q5T5C0 1151 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 RHBDF2Q6PJF5 856 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CENPUQ71F23 418 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ERASQ7Z444 233 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NT5DC3Q86UY8 548 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF683Q8IZ20 524 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TEX45Q8NA69 505 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OR56B1Q8NGI3 324 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OR1J1Q8NGS3 322 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TRMT10AQ8TBZ6 339 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TM9SF4Q92544 642 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SCRN2Q96FV2 425 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TPD52L3Q96J77 140 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SIKE1Q9BRV8 207 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TBC1D10AQ9BXI6 508 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 KCNN2Q9H2S1 579 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 MEAF6Q9HAF1 191 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 STARD5Q9NSY2 213 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 LNPEPQ9UIQ6 1025 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ANAPC7Q9UJX3 599 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OR10H1Q9Y4A9 318 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OR51B4Q9Y5P0 310 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SELENOKQ9Y6D0 94 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NCOR2Q9Y618 2525 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A0J9YVX5 310 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 IQCMA0A1B0GVH7 501 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 YJEFN3A6XGL0 299 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 C21orf140B9A014 251 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ATP8B1O43520 1251 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 BUB1O43683 1085 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PRAF2O60831 178 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 KLF8O95600 359 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OPN1MWP04001 364 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OPN1MW2P0DN77 364 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OPN1MW3P0DN78 364 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ACP2P11117 423 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF23P17027 643 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SHMT2P34897 504 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SPAM1P38567 509 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PTGER3P43115 390 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ATP6V0D1P61421 351 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 OTUD4Q01804 1114 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ACVR1Q04771 509 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CALCOCO2Q13137 446 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 GPS2Q13227 327 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SNTB2Q13425 540 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NDUFA9Q16795 377 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC5A12Q1EHB4 618 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 WSCD2Q2TBF2 565 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 KLHL38Q2WGJ6 581 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC37A5PQ49AS3 106 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 TEX44Q53QW1 395 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 WBP2NLQ6ICG8 309 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 NEPROQ6NW34 567 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 WDR74Q6RFH5 385 aaPredicted RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms