RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CENPSQ8N2Z9 138 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 ARIH2OSQ8N7S6 290 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 COLGALT1Q8NBJ5 622 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 GDAP1Q8TB36 358 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 ZNF721Q8TF20 911 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 DCUN1D4Q92564 292 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 BCL2L2Q92843 193 aaPredicted RBP2.35□□□□□ -2.03
COPS3-217ENST00000583160 MCHR2Q969V1 340 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 FGGYQ96C11 551 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 HAVCR1Q96D42 359 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 ABCG4Q9H172 646 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 PIGVQ9NUD9 493 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 MARCH5Q9NX47 278 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 ONECUT1Q9UBC0 465 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 FKBP7Q9Y680 259 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 LOC285556D6RIA3 1793 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 GAKO14976 1311 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 PLXNB2O15031 1838 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 DOCK2Q92608 1830 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 DOCK1Q14185 1865 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 CDK5RAP2Q96SN8 1893 aa2.35□□□□□ -2.03
COPS3-217ENST00000583160 COL6A3P12111 3177 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 ATAD5Q96QE3 1844 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 CXCL11O14625 94 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 BUB1O43683 1085 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 CIAO1O76071 339 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 STK17BO94768 372 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 SUPT7LO94864 414 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 SYNGR4O95473 234 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 STSP08842 583 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 HOXD10P28358 340 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 RFC2P35250 354 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 IL9RQ01113 521 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 EGFEM1PQ0D2K5 195 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 VGLL4Q14135 290 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 SHHQ15465 462 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 CCDC57Q2TAC2 916 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 CCDC184Q52MB2 194 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 GLRA4Q5JXX5 417 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 HECTD3Q5T447 861 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 ASPHD2Q6ICH7 369 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 TMEM270Q6UE05 265 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 ZNF589Q86UQ0 364 aaPredicted RBP2.34□□□□□ -2.03
COPS3-217ENST00000583160 ZNF561Q8N587 486 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 ZBTB44Q8NCP5 570 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 ZNF397Q8NF99 534 aaPredicted RBP2.34□□□□□ -2.03
COPS3-217ENST00000583160 FAM151AQ8WW52 585 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 TMEM45BQ96B21 275 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 NRTNQ99748 197 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 CARD6Q9BX69 1037 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 FUT8Q9BYC5 575 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 FAM124BQ9H5Z6 455 aaPredicted RBP2.34□□□□□ -2.03
COPS3-217ENST00000583160 PNO1Q9NRX1 252 aaKnown RBP2.34□□□□□ -2.03
COPS3-217ENST00000583160 COPS7AQ9UBW8 275 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 NAP1L2Q9ULW6 460 aaPredicted RBP2.34□□□□□ -2.03
COPS3-217ENST00000583160 DUSP12Q9UNI6 340 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 CACNG2Q9Y698 323 aa2.34□□□□□ -2.03
COPS3-217ENST00000583160 CEP290O15078 2479 aa2.34□□□□□ -2.04
COPS3-217ENST00000583160 ASTN1O14525 1302 aa2.34□□□□□ -2.04
COPS3-217ENST00000583160 TRIOBPQ9H2D6 2365 aa2.34□□□□□ -2.04
COPS3-217ENST00000583160 ZSWIM8A7E2V4 1837 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 SIPA1L1O43166 1804 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 AK9Q5TCS8 1911 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 CCL15-CCL14A0A0B4J2E2 113 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 ANKRD63C9JTQ0 380 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 H3BMH7 237 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 NME2P1O60361 137 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 CABYRO75952 493 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 TMOD1P28289 359 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 HTR1FP30939 366 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 CCL15Q16663 113 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 CAVIN4Q5BKX8 364 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 PNCKQ6P2M8 343 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 SYVN1Q86TM6 617 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 GPBP1Q86WP2 473 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 SERPINA12Q8IW75 414 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 ALLCQ8N6M5 410 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 ZNF540Q8NDQ6 660 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 LPCAT1Q8NF37 534 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 MARCH1Q8TCQ1 289 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 PSMG2Q969U7 264 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 OPTNQ96CV9 577 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 C5orf30Q96GV9 206 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 MMADHCQ9H3L0 296 aaPredicted RBP2.33□□□□□ -2.04
COPS3-217ENST00000583160 TDRD3Q9H7E2 651 aaKnown RBP2.33□□□□□ -2.04
COPS3-217ENST00000583160 IL1RAPL2Q9NP60 686 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 CD274Q9NZQ7 290 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 WSB1Q9Y6I7 421 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 FRMPD3Q5JV73 1810 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 ZNF236Q9UL36 1845 aa2.33□□□□□ -2.04
COPS3-217ENST00000583160 MYO5AQ9Y4I1 1855 aaKnown RBP2.33□□□□□ -2.04
COPS3-217ENST00000583160 DDX60LQ5H9U9 1706 aaKnown RBP2.32□□□□□ -2.04
COPS3-217ENST00000583160 MAST2Q6P0Q8 1798 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 A0A1W2PQ67 120 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 CLRN2A0PK11 232 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 LRRD1A4D1F6 860 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 SLC7A4O43246 635 aa2.32□□□□□ -2.04
COPS3-217ENST00000583160 RAMP1O60894 148 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms