RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 IL32P24001 234 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 ADH6P28332 368 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 MAP3K8P41279 467 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 ZNF41P51814 821 aaPredicted RBP12.06□□□□□ -0.48
SS18-222ENST00000582792 TSC22D1Q15714 1073 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
SS18-222ENST00000582792 PGGHGQ32M88 737 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 CHRFAM7AQ494W8 412 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 VPS26BQ4G0F5 336 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 TMEM201Q5SNT2 666 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 SFRP5Q5T4F7 317 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 OGFOD2Q6N063 350 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 GATSQ8NAP1 163 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 KBTBD8Q8NFY9 601 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 GPR151Q8TDV0 419 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 RNF128Q8TEB7 428 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 ABHD3Q8WU67 409 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 ROBO4Q8WZ75 1007 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 KLHL15Q96M94 604 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 NUF2Q9BZD4 464 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 TMEM185BQ9H7F4 350 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 AKTIPQ9H8T0 292 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 EQTNQ9NQ60 294 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 POLR3HQ9Y535 204 aaPredicted RBP12.06□□□□□ -0.48
SS18-222ENST00000582792 A8MV72 311 aaPredicted RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 SDHDO14521 159 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 ZNF195O14628 629 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 PEX11AO75192 247 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 NDUFS7O75251 213 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 NTN1O95631 604 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 BCKDHAP12694 445 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 LBPP18428 481 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 SDC1P18827 310 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 MDH1P40925 334 aaKnown RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 CARD18P57730 90 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 C21orf58P58505 322 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 RPL38P63173 70 aaKnown RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 BSPH1Q075Z2 132 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 FAPQ12884 760 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 RNPS1Q15287 305 aaKnown RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 GALNTL6Q49A17 601 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 SEZ6L2Q6UXD5 910 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 ZNF551Q7Z340 670 aaPredicted RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 NUFIP2Q7Z417 695 aaKnown RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 SPATA19Q7Z5L4 167 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 ATG4DQ86TL0 474 aaPredicted RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 TUSC5Q8IXB3 177 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 LILRA2Q8N149 483 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 ZNF619Q8N2I2 560 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 FNDC5Q8NAU1 212 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 POC1BQ8TC44 478 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 FAM110BQ8TC76 370 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 KISS1RQ969F8 398 aaPredicted RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 MTERF3Q96E29 417 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 REXO5Q96IC2 774 aaKnown RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 HS6ST2Q96MM7 605 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 USB1Q9BQ65 265 aaKnown RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 KLHDC3Q9BQ90 382 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 TRAF4Q9BUZ4 470 aaPredicted RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 TRIM2Q9C040 744 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 GRIP2Q9C0E4 1043 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 BARX1Q9HBU1 254 aaPredicted RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 SLCO1B3Q9NPD5 702 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 NOP53Q9NZM5 478 aaKnown RBP12.05□□□□□ -0.48
SS18-222ENST00000582792 KLHL13Q9P2N7 655 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 USH1CQ9Y6N9 552 aa12.05□□□□□ -0.48
SS18-222ENST00000582792 FREM1Q5H8C1 2179 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 DPRXA6NFQ7 191 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 PHF1O43189 567 aaPredicted RBP12.04□□□□□ -0.48
SS18-222ENST00000582792 EDF1O60869 148 aaKnown RBP12.04□□□□□ -0.48
SS18-222ENST00000582792 ADAP00813 363 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 CD8AP01732 235 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 FESP07332 822 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 KITP10721 976 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 SHC1P29353 583 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 RPL3P39023 403 aaKnown RBP12.04□□□□□ -0.48
SS18-222ENST00000582792 HSPB3Q12988 150 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 P2RY6Q15077 328 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 EPGNQ6UW88 154 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 R3HCC1LQ7Z5L2 792 aaKnown RBP12.04□□□□□ -0.48
SS18-222ENST00000582792 ZAR1Q86SH2 424 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 DTX2Q86UW9 622 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 MISPQ8IVT2 679 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 NATD1Q8N6N6 113 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 CDRT4Q8N9R6 151 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 CPNE4Q96A23 557 aaPredicted RBP12.04□□□□□ -0.48
SS18-222ENST00000582792 SH3YL1Q96HL8 342 aaPredicted RBP12.04□□□□□ -0.48
SS18-222ENST00000582792 SRXN1Q9BYN0 137 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 POTEKPQ9BYX7 375 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 ALG2Q9H553 416 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 GP6Q9HCN6 339 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 TIGARQ9NQ88 270 aa12.04□□□□□ -0.48
SS18-222ENST00000582792 MARCOQ9UEW3 520 aaPredicted RBP12.04□□□□□ -0.48
SS18-222ENST00000582792 GDF2Q9UK05 429 aaPredicted RBP12.04□□□□□ -0.48
SS18-222ENST00000582792 CADP27708 2225 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 A0A1W2PQD3 144 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 KCNK2O95069 426 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 F12P00748 615 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms