RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	KRT4	P19013	534 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	ITGAL	P20701	1170 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	CNTFR	P26992	372 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	GRIA1	P42261	906 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	MAGEA3	P43357	314 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	EVX1	P49640	407 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	BASP1	P80723	227 aa	Known RBP	4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	PAX2	Q02962	417 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	LCP2	Q13094	533 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	SLC13A2	Q13183	592 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	TFDP2	Q14188	446 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	RNPS1	Q15287	305 aa	Known RBP	4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	SGCB	Q16585	318 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	KLHL38	Q2WGJ6	581 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	CCSMST1	Q4G0I0	132 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	HHAT	Q5VTY9	493 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	PACS1	Q6VY07	963 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	C1orf122	Q6ZSJ8	110 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	GALNT10	Q86SR1	603 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	LRRC6	Q86X45	466 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	CDK20	Q8IZL9	346 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	CNTD1	Q8N815	330 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	C7orf57	Q8NEG2	295 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	OR2T6	Q8NHC8	308 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	TCP10L	Q8TDR4	215 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	KLHL29	Q96CT2	875 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	CFAP36	Q96G28	342 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	FBXL20	Q96IG2	436 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	MUS81	Q96NY9	551 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	TMEM237	Q96Q45	408 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	KATNB1	Q9BVA0	655 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	TPK1	Q9H3S4	243 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	MS4A5	Q9H3V2	200 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	METTL7A	Q9H8H3	244 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	PPCS	Q9HAB8	311 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	ETNK1	Q9HBU6	452 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	SNX15	Q9NRS6	342 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	RAB6B	Q9NRW1	208 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	ARL8B	Q9NVJ2	186 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	SENP1	Q9P0U3	644 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	KLHL42	Q9P2K6	505 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	TAC3	Q9UHF0	121 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	FBXL2	Q9UKC9	423 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	SIGLEC9	Q9Y336	463 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	ZNF337	Q9Y3M9	751 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	WIPI2	Q9Y4P8	454 aa		4.1	□□□□□ -1.75
MSI2-216	ENST00000582772	SERTM1	A2A2V5	107 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	FAM159B	A6NKW6	160 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	OR6C76	A6NM76	312 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772		B4DXG7	233 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	TRIM49D1	C9J1S8	452 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	APOL1	O14791	398 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	STX7	O15400	261 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	SYNGR3	O43761	229 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PEX11A	O75192	247 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	NCR1	O76036	304 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	NTN1	O95631	604 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	GUCA1C	O95843	209 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	IFNA16	P05015	189 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	SMIM10L1	P0DMW3	83 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	NAGA	P17050	411 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	NPR2	P20594	1047 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	BGN	P21810	368 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	SSTR4	P31391	388 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	STIP1	P31948	543 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PHB	P35232	272 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	SKIV2L2	P42285	1042 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PTDSS1	P48651	473 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	HNRNPF	P52597	415 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	DSCR4	P56555	118 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	MVK	Q03426	396 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	CHRNE	Q04844	493 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	SERTAD2	Q14140	314 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	RAB39A	Q14964	217 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PDK2	Q15119	407 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	TEX44	Q53QW1	395 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	AVPI1	Q5T686	147 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	NCBP2-AS2	Q69YL0	99 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	OR7E24	Q6IFN5	339 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	TRMT10B	Q6PF06	316 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	ADCK2	Q7Z695	626 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	STRA8	Q7Z7C7	330 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PALM2	Q8IXS6	379 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PDIK1L	Q8N165	341 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	C17orf78	Q8N4C9	275 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	POU5F2	Q8N7G0	328 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	DTX3	Q8N9I9	347 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	TMEM52	Q8NDY8	209 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	C17orf47	Q8NEP4	570 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	OR52B6	Q8NGF0	335 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	LRRC8C	Q8TDW0	803 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	ST7L	Q8TDW4	575 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	PYCR2	Q96C36	320 aa		4.09	□□□□□ -1.75
MSI2-216	ENST00000582772	ERP27	Q96DN0	273 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms