RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 MANFP55145 182 aaKnown RBP12.94□□□□□ -0.34
IFT20-211ENST00000580991 NAB1Q13506 487 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 HEPACAMQ14CZ8 416 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 KLHL17Q6TDP4 642 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 C3orf56Q8N813 242 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 PPM1NQ8N819 430 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 PTGR2Q8N8N7 351 aaPredicted RBP12.94□□□□□ -0.34
IFT20-211ENST00000580991 APOPT1Q96IL0 206 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 INPP5KQ9BT40 448 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 SRXN1Q9BYN0 137 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 KLHL14Q9P2G3 628 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 PCTPQ9UKL6 214 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 SNX6Q9UNH7 406 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 FKBP7Q9Y680 259 aa12.94□□□□□ -0.34
IFT20-211ENST00000580991 A0A0A6YYJ9 748 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 IGHV4-61A0A0C4DH41 118 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 GNG14A0A1W2PPG7 69 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 SLCO1B7G3V0H7 640 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 KLHL2O95198 593 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 PSMG1O95456 288 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 C2P06681 752 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 SNRPAP09012 282 aaKnown RBP12.93□□□□□ -0.34
IFT20-211ENST00000580991 COX5AP20674 150 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 CD40P25942 277 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 EIF1P41567 113 aaKnown RBP12.93□□□□□ -0.34
IFT20-211ENST00000580991 COMPP49747 757 aaPredicted RBP12.93□□□□□ -0.34
IFT20-211ENST00000580991 SLC18A2Q05940 514 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 SPOCK1Q08629 439 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 ARL13AQ5H913 290 aaPredicted RBP12.93□□□□□ -0.34
IFT20-211ENST00000580991 B3GLCTQ6Y288 498 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 POC1BQ8TC44 478 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 FAM110BQ8TC76 370 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 PHF21BQ96EK2 531 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 NSUN5Q96P11 429 aaKnown RBP12.93□□□□□ -0.34
IFT20-211ENST00000580991 LMF2Q9BU23 707 aaKnown RBP12.93□□□□□ -0.34
IFT20-211ENST00000580991 BCO1Q9HAY6 547 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 DDX18Q9NVP1 670 aaKnown RBP12.93□□□□□ -0.34
IFT20-211ENST00000580991 KLHL9Q9P2J3 617 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 PRSS50Q9UI38 385 aa12.93□□□□□ -0.34
IFT20-211ENST00000580991 GJE1A6NN92 205 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 STX16-NPEPL1H3BU86 382 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 UPK1AO00322 258 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 STX16O14662 325 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 SMAD9O15198 467 aaKnown RBP12.92□□□□□ -0.34
IFT20-211ENST00000580991 PCDH7O60245 1069 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 OTCP00480 354 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 JUNP05412 331 aaKnown RBP12.92□□□□□ -0.34
IFT20-211ENST00000580991 NGFRP08138 427 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 ZNF23P17027 643 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 IGHV1-2P23083 117 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 ELK4P28324 431 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 SHC1P29353 583 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 GABRA3P34903 492 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 ZNF83P51522 516 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 NCBP2P52298 156 aaKnown RBP eCLIP12.92□□□□□ -0.345e-8■■■□□ 15.2
IFT20-211ENST00000580991 IQCCQ4KMZ1 466 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 TMEM107Q6UX40 140 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 OR2L13Q8N349 312 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 ZNF540Q8NDQ6 660 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 FOXN4Q96NZ1 517 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 GPR78Q96P69 363 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 BHLHE41Q9C0J9 482 aaPredicted RBP12.92□□□□□ -0.34
IFT20-211ENST00000580991 IQCGQ9H095 443 aaKnown RBP12.92□□□□□ -0.34
IFT20-211ENST00000580991 VPS11Q9H270 941 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 MYNNQ9NPC7 610 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 MKS1Q9NXB0 559 aa12.92□□□□□ -0.34
IFT20-211ENST00000580991 TMEFF2Q9UIK5 374 aaPredicted RBP12.92□□□□□ -0.34
IFT20-211ENST00000580991 LOC390937A0A1W2PQ73 354 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 CFAP73A6NFT4 308 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 TTC36A6NLP5 189 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 MYO1GB0I1T2 1018 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 RGS14O43566 566 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 EDF1O60869 148 aaKnown RBP12.91□□□□□ -0.34
IFT20-211ENST00000580991 OXSR1O95747 527 aaPredicted RBP12.91□□□□□ -0.34
IFT20-211ENST00000580991 IGKV1D-16P01601 117 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 LINGO3P0C6S8 592 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 HSD3B1P14060 373 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 ENPP1P22413 925 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 HSD3B2P26439 372 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 ALDH3A1P30838 453 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 APOBEC3AP31941 199 aaPredicted RBP12.91□□□□□ -0.34
IFT20-211ENST00000580991 ACTG1P63261 375 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 LETMD1Q6P1Q0 360 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 MISPQ8IVT2 679 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 ZNF433Q8N7K0 673 aaPredicted RBP12.91□□□□□ -0.34
IFT20-211ENST00000580991 GATSQ8NAP1 163 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 OR52N5Q8NH56 324 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 TCP10LQ8TDR4 215 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 C16orf78Q8WTQ4 265 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 SH3YL1Q96HL8 342 aaPredicted RBP12.91□□□□□ -0.34
IFT20-211ENST00000580991 PSD2Q9BQI7 771 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 TRMOQ9BU70 441 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 OCEL1Q9H607 264 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 CXorf36Q9H7Y0 433 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 MYOZ1Q9NP98 299 aaPredicted RBP12.91□□□□□ -0.34
IFT20-211ENST00000580991 TMCO1Q9UM00 188 aa12.91□□□□□ -0.34
IFT20-211ENST00000580991 A0A096LPK6 155 aa12.9□□□□□ -0.34
IFT20-211ENST00000580991 GXYLT2A0PJZ3 443 aa12.9□□□□□ -0.34
IFT20-211ENST00000580991 TRIM49D1C9J1S8 452 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms