RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 ABHD3Q8WU67 409 aa12.23□□□□□ -0.45
GGA3-208ENST00000579743 ST8SIA1Q92185 356 aa12.23□□□□□ -0.45
GGA3-208ENST00000579743 ZHX1-C8orf76Q96EF9 292 aa12.23□□□□□ -0.45
GGA3-208ENST00000579743 ARSGQ96EG1 525 aa12.23□□□□□ -0.45
GGA3-208ENST00000579743 TRMT61AQ96FX7 289 aaKnown RBP12.23□□□□□ -0.45
GGA3-208ENST00000579743 MARK4Q96L34 752 aa12.23□□□□□ -0.45
GGA3-208ENST00000579743 C3orf30Q96M34 536 aa12.23□□□□□ -0.45
GGA3-208ENST00000579743 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
GGA3-208ENST00000579743 ANKZF1Q9H8Y5 726 aa12.23□□□□□ -0.45
GGA3-208ENST00000579743 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.23□□□□□ -0.45
GGA3-208ENST00000579743 NPIPA5A0A0B4J1W7 369 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 RNF103-CHMP3A0A140T963 221 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 SERINC4A6NH21 518 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 NPIPA7E9PJI5 369 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 H7C1Q1 480 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 BIRC5O15392 142 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 SERPINE1P05121 402 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 THBDP07204 575 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 CD3EP07766 207 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 NPIPA8P0DM63 369 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 ENPP1P22413 925 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 PTH2RP49190 550 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 CLNS1AP54105 237 aaKnown RBP12.22□□□□□ -0.45
GGA3-208ENST00000579743 VSNL1P62760 191 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 CSNK2A1P68400 391 aaPredicted RBP12.22□□□□□ -0.45
GGA3-208ENST00000579743 PPP2R2BQ00005 443 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 ITGADQ13349 1161 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 QPRTQ15274 297 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 PDCD2Q16342 344 aaPredicted RBP12.22□□□□□ -0.45
GGA3-208ENST00000579743 KRT71Q3SY84 523 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 SLC25A53Q5H9E4 307 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 PDZK1Q5T2W1 519 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 SFRP5Q5T4F7 317 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 Q71RC1 249 aaPredicted RBP12.22□□□□□ -0.45
GGA3-208ENST00000579743 CROCCP2Q86T23 111 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 TUSC5Q8IXB3 177 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 SLC25A43Q8WUT9 341 aaPredicted RBP12.22□□□□□ -0.45
GGA3-208ENST00000579743 NUDT8Q8WV74 236 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 S100PBPQ96BU1 408 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 COX4I2Q96KJ9 171 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 OR5B2Q96R09 309 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 NPAS1Q99742 590 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 LAT2Q9GZY6 243 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 POLE3Q9NRF9 147 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 EMC3Q9P0I2 261 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 SLC35A3Q9Y2D2 325 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 RAP2CQ9Y3L5 183 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 RNF115Q9Y4L5 304 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 ARID1AO14497 2285 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 AKAP9Q99996 3911 aa12.22□□□□□ -0.45
GGA3-208ENST00000579743 DSCAMO60469 2012 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 PRSS51A0A1B0GVH4 220 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 ANKRD28O15084 1053 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 TM9SF1O15321 606 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 TYROBPO43914 113 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 UQCRC2P22695 453 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 CHI3L1P36222 383 aaPredicted RBP12.21□□□□□ -0.45
GGA3-208ENST00000579743 RPL14P50914 215 aaKnown RBP12.21□□□□□ -0.45
GGA3-208ENST00000579743 ATP5J2P56134 94 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 ABCE1P61221 599 aaKnown RBP12.21□□□□□ -0.45
GGA3-208ENST00000579743 RPS4XP62701 263 aaKnown RBP12.21□□□□□ -0.45
GGA3-208ENST00000579743 RASGEF1BQ0VAM2 473 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 MERTKQ12866 999 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 CHI3L2Q15782 390 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 ZNF141Q15928 474 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 ARHGAP11BQ3KRB8 267 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 TIGD2Q4W5G0 525 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 OR4F3Q6IEY1 312 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 WDR93Q6P2C0 686 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 TFAP2EQ6VUC0 442 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 KRTAP1-3Q8IUG1 177 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 ZNF100Q8IYN0 542 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 LRRC34Q8IZ02 419 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 TRIML2Q8N7C3 387 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 OR8J2Q8NGG1 315 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 OR5D16Q8NGK9 328 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 ZNF563Q8TA94 476 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 AENQ8WTP8 325 aaKnown RBP12.21□□□□□ -0.45
GGA3-208ENST00000579743 XAGE5Q8WWM1 108 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 AKAP1Q92667 903 aaKnown RBP eCLIP12.21□□□□□ -0.45
GGA3-208ENST00000579743 FBXW5Q969U6 566 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 SMR3AQ99954 134 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 THUMPD3Q9BV44 507 aaKnown RBP12.21□□□□□ -0.45
GGA3-208ENST00000579743 SRXN1Q9BYN0 137 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 SSU72Q9NP77 194 aaKnown RBP12.21□□□□□ -0.45
GGA3-208ENST00000579743 WDR45Q9Y484 360 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 KCNE3Q9Y6H6 103 aa12.21□□□□□ -0.45
GGA3-208ENST00000579743 NAV3Q8IVL0 2385 aa12.21□□□□□ -0.46
GGA3-208ENST00000579743 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.46
GGA3-208ENST00000579743 WDR91A4D1P6 747 aa12.2□□□□□ -0.46
GGA3-208ENST00000579743 NPIPB9F8W1W9 429 aa12.2□□□□□ -0.46
GGA3-208ENST00000579743 SULT2B1O00204 365 aa12.2□□□□□ -0.46
GGA3-208ENST00000579743 SMAD7O15105 426 aaKnown RBP12.2□□□□□ -0.46
GGA3-208ENST00000579743 CLOCKO15516 846 aa12.2□□□□□ -0.46
GGA3-208ENST00000579743 CNOT4O95628 575 aaKnown RBP12.2□□□□□ -0.46
GGA3-208ENST00000579743 CPSF4O95639 269 aaKnown RBP12.2□□□□□ -0.46
GGA3-208ENST00000579743 ADAP00813 363 aa12.2□□□□□ -0.46
GGA3-208ENST00000579743 GUSBP08236 651 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms