RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 XAGE5Q8WWM1 108 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 CNOT9Q92600 299 aaKnown RBP7.78□□□□□ -1.16
SMG6-216ENST00000575176 SPDL1Q96EA4 605 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 TMEM19Q96HH6 336 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 ITCHQ96J02 903 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 PIGQQ9BRB3 760 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 CCDC106Q9BWC9 280 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 TMEM120AQ9BXJ8 343 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 LAT2Q9GZY6 243 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 HOXD1Q9GZZ0 328 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 TMEM185BQ9H7F4 350 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 CHST11Q9NPF2 352 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 EXOSC3Q9NQT5 275 aaKnown RBP7.78□□□□□ -1.16
SMG6-216ENST00000575176 COQ3Q9NZJ6 369 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 CCDC167Q9P0B6 97 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 ZNF629Q9UEG4 869 aaPredicted RBP7.78□□□□□ -1.16
SMG6-216ENST00000575176 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 ZNF175Q9Y473 711 aa7.78□□□□□ -1.16
SMG6-216ENST00000575176 PRRC2AP48634 2157 aaKnown RBP7.78□□□□□ -1.16
SMG6-216ENST00000575176 ZANQ9Y493 2812 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 FLNAP21333 2647 aaKnown RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 A0A1W2PP18 115 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 A0A1W2PPR1 153 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 CDHR4A6H8M9 788 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 LINC01387J3KSC0 135 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 FAAHO00519 579 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 SIAH2O43255 324 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 SS18L1O75177 396 aaPredicted RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 AGR2O95994 175 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 BCHEP06276 602 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 UBTFL6P0CB48 400 aaPredicted RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 TMIGD3P0DMS9 266 aaPredicted RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 ARAFP10398 606 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 ATP6V1C1P21283 382 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 EDNRAP25101 427 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 CTSSP25774 331 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 ADH6P28332 368 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 CHI3L1P36222 383 aaPredicted RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 ACAA2P42765 397 aaKnown RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 ASCL1P50553 236 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 AGFG1P52594 562 aaKnown RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 PCBP3P57721 371 aaKnown RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 DSTNP60981 165 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 RAC1P63000 192 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 IRX1P78414 480 aaPredicted RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 SNTB1Q13884 538 aaKnown RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 PON3Q15166 354 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 ZNF239Q16600 458 aaKnown RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 MRPL2Q5T653 305 aaKnown RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 RNF220Q5VTB9 566 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 ZNF474Q6S9Z5 364 aaPredicted RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 ZNF621Q6ZSS3 439 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 C22orf34Q6ZV56 151 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 C16orf62Q7Z3J2 963 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 NET1Q7Z628 596 aaPredicted RBP7.77□□□□□ -1.17
SMG6-216ENST00000575176 MCEMP1Q8IX19 187 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 FBXO27Q8NI29 283 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 RNF128Q8TEB7 428 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 DYDC1Q8WWB3 177 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 MAL2Q969L2 176 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 STARD4Q96DR4 205 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 C14orf79Q96F83 325 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 CHMP6Q96FZ7 201 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 MRGPRX4Q96LA9 322 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 ZFP3Q96NJ6 502 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 ZBTB18Q99592 522 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 WFDC6Q9BQY6 131 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 SIKE1Q9BRV8 207 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 SFXN3Q9BWM7 321 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 PINK1Q9BXM7 581 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 PTGES2Q9H7Z7 377 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 BCL2L10Q9HD36 194 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 A4GALTQ9NPC4 353 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 MED4Q9NPJ6 270 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 EXD2Q9NVH0 621 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 ALKBH4Q9NXW9 302 aa7.77□□□□□ -1.17
SMG6-216ENST00000575176 NF1P21359 2839 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SLC22A20A6NK97 555 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 TMEM229AB2RXF0 380 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 ZNF814B7Z6K7 855 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 FAM47E-STBD1D6RA91 191 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 CLIC1O00299 241 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SYT5O00445 386 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 TNFSF11O14788 317 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SMAD9O15198 467 aaKnown RBP7.76□□□□□ -1.17
SMG6-216ENST00000575176 CXCL13O43927 109 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 CSTAP01040 98 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 OPN1LWP04000 364 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SNRPB2P08579 225 aaKnown RBP7.76□□□□□ -1.17
SMG6-216ENST00000575176 PRG2P13727 222 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 GPX2P18283 190 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 CLK3P49761 638 aaKnown RBP7.76□□□□□ -1.17
SMG6-216ENST00000575176 SESN3P58005 492 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 KCNJ10P78508 379 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 EPS8Q12929 822 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 FADDQ13158 208 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SELENBP1Q13228 472 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 AGKQ53H12 422 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 ABLIM2Q6H8Q1 611 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SEZ6L2Q6UXD5 910 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms