RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 RFX3P48380 749 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 PSMD4P55036 377 aaKnown RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 RGS8P57771 180 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 TAF13Q15543 124 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 FAM69AQ5T7M9 428 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF322Q6U7Q0 402 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 C16orf78Q8WTQ4 265 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 FOXJ1Q92949 421 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 TINAGL1Q9GZM7 467 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 SLC6A16Q9GZN6 736 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 FZD3Q9NPG1 666 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 TDP1Q9NUW8 608 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 POT1Q9NUX5 634 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 GPATCH2Q9NW75 528 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 SPHK1Q9NYA1 384 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 IL20Q9NYY1 176 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 KCMF1Q9P0J7 381 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 KLHL9Q9P2J3 617 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 P2RX2Q9UBL9 471 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 PURGQ9UJV8 347 aaKnown RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 NPIPB15A6NHN6 443 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 F5H0A9 414 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 RTCAO00442 366 aaKnown RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CDC123O75794 336 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ALPPL2P10696 532 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 HOXB9P17482 250 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 HTR2AP28223 471 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SP140Q13342 867 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SYPL1Q16563 259 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 TMEM69Q5SWH9 247 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 AVPI1Q5T686 147 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ZDHHC20Q5W0Z9 365 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 HEPHL1Q6MZM0 1159 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CORO6Q6QEF8 472 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CDH26Q8IXH8 852 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 OR6V1Q8N148 313 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CPXM2Q8N436 756 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 DCAF4L2Q8NA75 395 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 BBS1Q8NFJ9 593 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 GNPDA2Q8TDQ7 276 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ARL5BQ96KC2 179 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SLC35G5Q96KT7 338 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ADAT1Q9BUB4 502 aaKnown RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ZCCHC2Q9C0B9 1178 aaKnown RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 FN3KQ9H479 309 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 MED20Q9H944 212 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 FGF20Q9NP95 211 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CA10Q9NS85 328 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 IRAK3Q9Y616 596 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ARRDC5A6NEK1 342 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 A8MXK9 166 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 DNASE2O00115 360 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SC5DO75845 299 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ARL6IP5O75915 188 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SNAPC5O75971 98 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF8P17098 575 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ACHEP22303 614 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 GABRR2P28476 465 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 UBE2IP63279 158 aaKnown RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SLC6A19Q695T7 634 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 VASNQ6EMK4 673 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 LINC00471Q8N535 108 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 KCT2Q8NC54 265 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 OR5M1Q8NGP8 315 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 LGALS14Q8TCE9 139 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 OSTF1Q92882 214 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 GAL3ST1Q99999 423 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SOSTQ9BQB4 213 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 EXO5Q9H790 373 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ISYNA1Q9NPH2 558 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 TESQ9UGI8 421 aaKnown RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 FRYLO94915 3013 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ZC3H12DA2A288 527 aaKnown RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 METTL21EPA6NDL7 271 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ANTXRLA6NF34 631 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 LEFTY2O00292 366 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 LCMT2O60294 686 aaKnown RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 PRAMEF4O60810 478 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SLC16A8O95907 504 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 IGF2P01344 180 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ANKRD34CP0C6C1 535 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 HOXB3P14651 431 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-212ENST00000574799 GABRA1P14867 456 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 HSD3B2P26439 372 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 PTGER1P34995 402 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CCR9P51686 369 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 CLDN12P56749 244 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ZP1P60852 638 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 PRAMEF9Q5VWM5 478 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 RPTNQ6XPR3 784 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SLC9B2Q86UD5 537 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF546Q86UE3 836 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ADIPOR2Q86V24 386 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 MMP21Q8N119 569 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 OR52I2Q8NH67 350 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 SFT2D1Q8WV19 159 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ASB11Q8WXH4 323 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 HSD17B8Q92506 261 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 TMEM169Q96HH4 297 aa8.92□□□□□ -0.98
CCDC40-212ENST00000574799 ORAI3Q9BRQ5 295 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms