RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 NDUFV2P19404 249 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 FPR3P25089 353 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 ST3GAL3Q11203 375 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 LDLRAD1Q5T700 205 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 ZNF626Q68DY1 528 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 SLC24A5Q71RS6 500 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 NAXDQ8IW45 347 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 AMER3Q8N944 861 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 PXT1Q8NFP0 134 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 BPIFCQ8NFQ6 507 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 OR5T2Q8NGG2 359 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 DIO2Q92813 273 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 GLIPR2Q9H4G4 154 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 ZNF275Q9NSD4 429 aaPredicted RBP13.39□□□□□ -0.27
SMG6-215ENST00000574501 ABRACLQ9P1F3 81 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 SLC13A4Q9UKG4 626 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 SLC6A5Q9Y345 797 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 PPIL1Q9Y3C6 166 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 Q9Y3F1 56 aa13.39□□□□□ -0.27
SMG6-215ENST00000574501 GOLGA4Q13439 2230 aaKnown RBP13.39□□□□□ -0.27
SMG6-215ENST00000574501 CDHR4A6H8M9 788 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 OR6C74A6NCV1 312 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 PRSS44E7EML9 344 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 TMPRSS11DO60235 418 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 FMO6PO60774 539 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 THY1P04216 161 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 ATP1B1P05026 303 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 CLUP10909 449 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 ZNF35P13682 527 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 DCTDP32321 178 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 OR1D2P34982 312 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 FGL1Q08830 312 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 SCRN3Q0VDG4 424 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 MAPK14Q16539 360 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 HES5Q5TA89 166 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 SLC44A3Q8N4M1 653 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 KCT2Q8NC54 265 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 OR10K1Q8NGX5 313 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 C16orf58Q96GQ5 468 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 PTPN18Q99952 460 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 SGPP1Q9BX95 441 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 COA4Q9NYJ1 87 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 TAS2R5Q9NYW4 299 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 TAS2R3Q9NYW6 316 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 OPN4Q9UHM6 478 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 PLCL2Q9UPR0 1127 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 EOMESO95936 686 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 ZGLP1P0C6A0 271 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
SMG6-215ENST00000574501 BSGP35613 385 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 HCCSP53701 268 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 MAT1AQ00266 395 aaKnown RBP13.38□□□□□ -0.27
SMG6-215ENST00000574501 GPNMBQ14956 572 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 UBXN2BQ14CS0 331 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 OR7E24Q6IFN5 339 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 ZC3H14Q6PJT7 736 aaKnown RBP13.38□□□□□ -0.27
SMG6-215ENST00000574501 LRRN1Q6UXK5 716 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 ADCK2Q7Z695 626 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 GID4Q8IVV7 300 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 ARL14EPQ8N8R7 260 aaPredicted RBP13.38□□□□□ -0.27
SMG6-215ENST00000574501 MYLIPQ8WY64 445 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 KISS1RQ969F8 398 aaPredicted RBP13.38□□□□□ -0.27
SMG6-215ENST00000574501 PNPLA2Q96AD5 504 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 PINK1Q9BXM7 581 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 SEMA4CQ9C0C4 833 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 AHSPQ9NZD4 102 aa13.38□□□□□ -0.27
SMG6-215ENST00000574501 NUMA1Q14980 2115 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 FEZF1A0PJY2 475 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 CTDSPLO15194 276 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 HMGN1P05114 100 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 GLAP06280 429 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 MAT2AP31153 395 aaKnown RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 SLC11A1P49279 550 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 TMEM115Q12893 351 aaPredicted RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 ZNF750Q32MQ0 723 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 MPP7Q5T2T1 576 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 SSX6Q7RTT6 188 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 PM20D2Q8IYS1 436 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 RFLNBQ8N5W9 214 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 SUN3Q8TAQ9 357 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 ZCCHC2Q9C0B9 1178 aaKnown RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 GPN1Q9HCN4 374 aaPredicted RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 SCN10AQ9Y5Y9 1956 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 HMSDA8MTL9 139 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 PPM1DO15297 605 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 STX11O75558 287 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 FGBP02675 491 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 HMGN2P05204 90 aaKnown RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 ASGR2P07307 311 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 PRG2P13727 222 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 TYRP14679 529 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 ACHEP22303 614 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 NCBP2P52298 156 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMG6-215ENST00000574501 CLDN12P56749 244 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 SERTAD2Q14140 314 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 TRAM1Q15629 374 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 RPE65Q16518 533 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 POM121L1PQ3SYA9 428 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 UBE2NLQ5JXB2 153 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms