RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SYNDIG1LA6NDD5 238 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SERINC4A6NH21 518 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SAGE2PA6NJ88 616 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 RHPN2P1A8MT19 583 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 K7ESF4 209 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 KPNA4O00629 521 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 BHLHE40O14503 412 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CDC42EP2O14613 210 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 BCAT2O15382 392 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 TOX3O15405 576 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CHP2O43745 196 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 HYAL3O43820 417 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 IL33O95760 270 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 BPNT1O95861 308 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ONECUT2O95948 504 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 IGHA1P01876 353 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 DCNP07585 359 aaKnown RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 HBQ1P09105 142 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ZGLP1P0C6A0 271 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 GKN3PP0CG01 181 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 LIMS3P0CW19 117 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 LIMS4P0CW20 117 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 HSMCR30P0CW71 290 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 GIMD1P0DJR0 217 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 IMPDH2P12268 514 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CKMT1AP12532 417 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 BMP4P12644 408 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 GNSP15586 552 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PNLIPP16233 465 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 GLB1P16278 677 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 MYL12AP19105 171 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CD53P19397 219 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 MAKP20794 623 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 TBXA2RP21731 343 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 GALP22466 123 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CD1CP29017 333 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 FGF9P31371 208 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 IDUAP35475 653 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ETV5P41161 510 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ETV1P50549 477 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 AFF3P51826 1226 aaKnown RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 FXYD6P3P58550 94 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 DCAF7P61962 342 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 BTG2P78543 158 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 GPLD1P80108 840 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ZXDAP98168 799 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CFHR1Q03591 330 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ITGADQ13349 1161 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 FHL1Q13642 323 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 C1DQ13901 141 aaKnown RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 DOC2BQ14184 412 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF267Q14586 743 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 OXA1LQ15070 435 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 MED22Q15528 200 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 INAQ16352 499 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 TSTQ16762 297 aaKnown RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ISXQ2M1V0 245 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 DEFB110Q30KQ9 67 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PLK5Q496M5 336 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 FLYWCH1Q4VC44 716 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF362Q5T0B9 420 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CD200R1LQ6Q8B3 271 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 WDR74Q6RFH5 385 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 C6orf15Q6UXA7 325 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 NPSR1Q6W5P4 371 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 WDR88Q6ZMY6 472 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 QSOX2Q6ZRP7 698 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 DCDC5Q6ZRR9 648 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 MEPCEQ7L2J0 689 aaKnown RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 NUP54Q7Z3B4 507 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PRSS42Q7Z5A4 293 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 BCDIN3DQ7Z5W3 292 aaKnown RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 IGFN1Q86VF2 1251 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PLXDC1Q8IUK5 500 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 EGFL6Q8IUX8 553 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 GID4Q8IVV7 300 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PHC2Q8IXK0 858 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 TMCO5AQ8N6Q1 288 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 BCORP1Q8N888 145 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PSD4Q8NDX1 1056 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 FAM71CQ8NEG0 241 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 OR4N2Q8NGD1 307 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 OR9Q1Q8NGQ5 310 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 OR52N1Q8NH53 320 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 STK35Q8TDR2 534 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 DOK4Q8TEW6 326 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PTPMT1Q8WUK0 201 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM255BQ8WV15 326 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 DNAJA4Q8WW22 397 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 LIPHQ8WWY8 451 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PTP4A1Q93096 173 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 BPIFA2Q96DR5 249 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 HSPBAP1Q96EW2 488 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PEX11GQ96HA9 241 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SENP5Q96HI0 755 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SLC41A2Q96JW4 573 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SAMD8Q96LT4 415 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 LRFN5Q96NI6 719 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SLC46A1Q96NT5 459 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 TGM7Q96PF1 710 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms