RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 ABOP16442 354 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 AGAP20933 346 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 HCCSP53701 268 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 ITGA1P56199 1179 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 IL10RBQ08334 325 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 OR4D1Q15615 310 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 TMEM95Q3KNT9 176 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 CTXN3Q4LDR2 81 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 COQ5Q5HYK3 327 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 TMEM255AQ5JRV8 349 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 GDPGP1Q6ZNW5 385 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 Q6ZTK2 550 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.11□□□□□ -0.79
CLK3-226ENST00000569406 TMEM200AQ86VY9 491 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 MDGA1Q8NFP4 955 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 GPR150Q8NGU9 434 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 CDK15Q96Q40 435 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 CYP2S1Q96SQ9 504 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 EPHX3Q9H6B9 360 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 MED17Q9NVC6 651 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 AGAP14A8MT82 685 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 OR4F21O95013 312 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 GJB5O95377 273 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 MLYCDO95822 493 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 GUSBP08236 651 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 ADRA2AP08913 450 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 CD1DP15813 335 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 SH3BP2P78314 561 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 SIM1P81133 766 aaPredicted RBP10.11□□□□□ -0.79
CLK3-226ENST00000569406 CNTN1Q12860 1018 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 UNC50Q53HI1 259 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 ZRANB3Q5FWF4 1079 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 C18orf63Q68DL7 685 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 OR4F3Q6IEY1 312 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 ZNF730Q6ZMV8 503 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 OR6K3Q8NGY3 331 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 ADAD1Q96M93 576 aaKnown RBP10.11□□□□□ -0.79
CLK3-226ENST00000569406 MGME1Q9BQP7 344 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 TUBB1Q9H4B7 451 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 ZNF69Q9UC07 566 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 GDF2Q9UK05 429 aaPredicted RBP10.11□□□□□ -0.79
CLK3-226ENST00000569406 FLVCR2Q9UPI3 526 aa10.11□□□□□ -0.79
CLK3-226ENST00000569406 MYO10Q9HD67 2058 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 OR6C76A6NM76 312 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 SH3BGRLO75368 114 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 NSA2O95478 260 aaKnown RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 HMGA1P17096 107 aaKnown RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 DNAJA1P31689 397 aaKnown RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 CDC34P49427 236 aaPredicted RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 CDKN1CP49918 316 aaPredicted RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 ZNF140P52738 457 aaPredicted RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 PTGR1Q14914 329 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 ARHGAP19Q14CB8 494 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 ZNF678Q5SXM1 525 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 C19orf48Q6RUI8 117 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 IL27RAQ6UWB1 636 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 PRSS55Q6UWB4 352 aaPredicted RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 ZNF619Q8N2I2 560 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 FBXO15Q8NCQ5 510 aaPredicted RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 DBF4BQ8NFT6 615 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 OR56B2PQ8NGI1 322 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 OR5M1Q8NGP8 315 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 RAB24Q969Q5 203 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 EID2BQ96D98 161 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 SEMA3CQ99985 751 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 TAPBPLQ9BX59 468 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 CA10Q9NS85 328 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 FAM86C1Q9NVL1 165 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 EPXP11678 715 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 PEPDP12955 493 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 PKMP14618 531 aaKnown RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 BDKRB2P30411 391 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 BMI1P35226 326 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 TAGLN2P37802 199 aaKnown RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 ZFP36L2P47974 494 aaKnown RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 NHLRC1Q6VVB1 395 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 SLC35F3Q8IY50 421 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 TOMM5Q8N4H5 51 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 BMPERQ8N8U9 685 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 NETO1Q8TDF5 533 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 HSD17B8Q92506 261 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 FBXO32Q969P5 355 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 HRASLS5Q96KN8 279 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 MRGPRX4Q96LA9 322 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 ATOH8Q96SQ7 321 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 MTERF1Q99551 399 aaKnown RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 REEP1Q9H902 201 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 RNF122Q9H9V4 155 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 PARD6AQ9NPB6 346 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 CNTRLQ7Z7A1 2325 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 A0A0G2JN53 185 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 ZNF726A6NNF4 738 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 EFSO43281 561 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 CA11O75493 328 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 SCAF4O95104 1147 aaKnown RBP10.1□□□□□ -0.79
CLK3-226ENST00000569406 MT-ND4P03905 459 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 HEXAP06865 529 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 GALTP07902 379 aa10.1□□□□□ -0.79
CLK3-226ENST00000569406 FPR1P21462 350 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms