RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 TSPAN8P19075 237 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 CD80P33681 288 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 ZNF136P52737 540 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 UNC119Q13432 240 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 EXOSC2Q13868 293 aaKnown RBP1.73□□□□□ -2.13
UBR1-209ENST00000569243 TMEM52BQ4KMG9 183 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 C1QTNF12Q5T7M4 302 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 FAHD2BQ6P2I3 314 aaPredicted RBP1.73□□□□□ -2.13
UBR1-209ENST00000569243 WASH2PQ6VEQ5 465 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 SYT10Q6XYQ8 523 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 GET4Q7L5D6 327 aaPredicted RBP1.73□□□□□ -2.13
UBR1-209ENST00000569243 MINDY2Q8NBR6 621 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 CCNYQ8ND76 341 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 ZNF740Q8NDX6 193 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 FAM71CQ8NEG0 241 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 OR5AU1Q8NGC0 362 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 AENQ8WTP8 325 aaKnown RBP1.73□□□□□ -2.13
UBR1-209ENST00000569243 PIGCQ92535 297 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 RNF185Q96GF1 192 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 FAHD2AQ96GK7 314 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 OR2M2Q96R28 347 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 DUSP16Q9BY84 665 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 TMEM231Q9H6L2 316 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 EML4Q9HC35 981 aaKnown RBP1.73□□□□□ -2.13
UBR1-209ENST00000569243 ZNF282Q9UDV7 671 aaPredicted RBP1.73□□□□□ -2.13
UBR1-209ENST00000569243 NUFIP1Q9UHK0 495 aaKnown RBP1.73□□□□□ -2.13
UBR1-209ENST00000569243 ANGPTL2Q9UKU9 493 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 TBX21Q9UL17 535 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 ERVW-1Q9UQF0 538 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 UGT2A1Q9Y4X1 527 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 AP4B1Q9Y6B7 739 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 CUX2O14529 1486 aa1.73□□□□□ -2.13
UBR1-209ENST00000569243 UBE4BO95155 1302 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 IGKV1D-17A0A075B6S4 117 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 CFAP73A6NFT4 308 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 GFYI3L273 518 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 SSX5O60225 188 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 FAM189A1O60320 539 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 MED6O75586 246 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 KLF8O95600 359 aaPredicted RBP1.72□□□□□ -2.13
UBR1-209ENST00000569243 CRISP2P16562 243 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 COX7A1P24310 79 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 PRDX6P30041 224 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 AKT2P31751 481 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 EPHX2P34913 555 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 LONP1P36776 959 aaKnown RBP1.72□□□□□ -2.13
UBR1-209ENST00000569243 CSNK1G2P78368 415 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 NTHL1P78549 312 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 RGS1Q08116 209 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 PTGES3Q15185 160 aaKnown RBP1.72□□□□□ -2.13
UBR1-209ENST00000569243 CCDC40Q4G0X9 1142 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 C1orf146Q5VVC0 180 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 ACP7Q6ZNF0 438 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 NRMQ8IXM6 262 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 EFCAB13Q8IY85 973 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 CELF6Q96J87 481 aaKnown RBP1.72□□□□□ -2.13
UBR1-209ENST00000569243 NSMCE2Q96MF7 247 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 OR5B2Q96R09 309 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 CYP2S1Q96SQ9 504 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 POLR2J2Q9GZM3 115 aaKnown RBP1.72□□□□□ -2.13
UBR1-209ENST00000569243 POLR2J3Q9H1A7 115 aaKnown RBP1.72□□□□□ -2.13
UBR1-209ENST00000569243 ZNF385DQ9H6B1 395 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 UTP6Q9NYH9 597 aaKnown RBP1.72□□□□□ -2.13
UBR1-209ENST00000569243 RBAKQ9NYW8 714 aaPredicted RBP1.72□□□□□ -2.13
UBR1-209ENST00000569243 ASF1AQ9Y294 204 aa1.72□□□□□ -2.13
UBR1-209ENST00000569243 RPGRIP1LQ68CZ1 1315 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 DDX39AO00148 427 aaKnown RBP1.71□□□□□ -2.14
UBR1-209ENST00000569243 SULT2B1O00204 365 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 SLITRK3O94933 977 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 IGKV1-17P01599 117 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 OPN1LWP04000 364 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 IGFBP3P17936 291 aaPredicted RBP1.71□□□□□ -2.14
UBR1-209ENST00000569243 TBPP20226 339 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 SFNP31947 248 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 MNAT1P51948 309 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 SH3BGRP55822 239 aaPredicted RBP1.71□□□□□ -2.14
UBR1-209ENST00000569243 MAP2K1Q02750 393 aaPredicted RBP1.71□□□□□ -2.14
UBR1-209ENST00000569243 CCDC173Q0VFZ6 552 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 RAB40BQ12829 278 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 GAMTQ14353 236 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 LAGE3Q14657 143 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 ATXN7L3Q14CW9 347 aaPredicted RBP1.71□□□□□ -2.14
UBR1-209ENST00000569243 ADPRMQ3LIE5 342 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 TIGITQ495A1 244 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 DNAJC21Q5F1R6 531 aaKnown RBP1.71□□□□□ -2.14
UBR1-209ENST00000569243 TMEM255AQ5JRV8 349 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 FAM71E1Q6IPT2 247 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 TMEM26Q6ZUK4 368 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 RABEPKQ7Z6M1 372 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 SVOPLQ8N434 492 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 OR56B1Q8NGI3 324 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 PHF10Q8WUB8 498 aaKnown RBP1.71□□□□□ -2.14
UBR1-209ENST00000569243 FAM151AQ8WW52 585 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 SELENOMQ8WWX9 145 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 VSTM2LQ96N03 204 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 PLGRKTQ9HBL7 147 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 SYTL2Q9HCH5 934 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 AIG1Q9NVV5 245 aa1.71□□□□□ -2.14
UBR1-209ENST00000569243 STOX2Q9P2F5 926 aaPredicted RBP1.71□□□□□ -2.14
UBR1-209ENST00000569243 MTRF1LQ9UGC7 380 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms