RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ZNF350Q9GZX5 532 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 OPN3Q9H1Y3 402 aaPredicted RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 CXXC4Q9H2H0 198 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 LIME1Q9H400 295 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 SERHL2Q9H4I8 314 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PLEKHF2Q9H8W4 249 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 FANCFQ9NPI8 374 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 TIGARQ9NQ88 270 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 POLE3Q9NRF9 147 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PLSCR4Q9NRQ2 329 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CCM2LQ9NUG4 571 aaPredicted RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 EXD2Q9NVH0 621 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PNPOQ9NVS9 261 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 THAP1Q9NVV9 213 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ZNF226Q9NYT6 803 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 BTNL2Q9UIR0 455 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ICAM5Q9UMF0 924 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PROCRQ9UNN8 238 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CARD8Q9Y2G2 431 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 EMC9Q9Y3B6 208 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 TESMINQ9Y4I5 508 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 KCNE3Q9Y6H6 103 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PRRC2AP48634 2157 aaKnown RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 ITPR3Q14573 2671 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 CCDC168Q8NDH2 2452 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 A0A0J9YW62 118 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 SERINC4A6NH21 518 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 C16orf97H3BN30 126 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ETV2O00321 342 aaPredicted RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 SDHDO14521 159 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ZNF195O14628 629 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 OIP5O43482 229 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 CXCL13O43927 109 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 KIAA0513O60268 411 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 FCMRO60667 390 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 DNAJA2O60884 412 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 SNNO75324 88 aaPredicted RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 UGT2B17O75795 530 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 NTN1O95631 604 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 OPN1LWP04000 364 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 PGRP06401 933 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 NID1P14543 1247 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 PRKCAP17252 672 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 CRYGSP22914 178 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 AGTR1P30556 359 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 CCKARP32238 428 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 S100A3P33764 101 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 SFTPDP35247 375 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 CHI3L1P36222 383 aaPredicted RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 SLC6A8P48029 635 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 KHKP50053 298 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 WDR4P57081 412 aaKnown RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 CARD18P57730 90 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 MAGOHP61326 146 aaKnown RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 PHC1P78364 1004 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 TXNL4AP83876 142 aaKnown RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 SELENBP1Q13228 472 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 SKP2Q13309 424 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 KEAP1Q14145 624 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 QPRTQ15274 297 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 RNPS1Q15287 305 aaKnown RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 ZNF141Q15928 474 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ZNF239Q16600 458 aaKnown RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 FAM174BQ3ZCQ3 159 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 SLC25A53Q5H9E4 307 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 BEND6Q5SZJ8 279 aaPredicted RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 PDZK1Q5T2W1 519 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 AP1ARQ63HQ0 302 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 SAXO2Q658L1 398 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ATG16L1Q676U5 607 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 HEPHL1Q6MZM0 1159 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 C3orf33Q6P1S2 294 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 TNFAIP8L2Q6P589 184 aaPredicted RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 BEND4Q6ZU67 534 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 EIF3MQ7L2H7 374 aaKnown RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 STK32CQ86UX6 486 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 CLEC4FQ8N1N0 589 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ZNF614Q8N883 585 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ZNF610Q8N9Z0 462 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 GLB1L3Q8NCI6 653 aaPredicted RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 FAM71CQ8NEG0 241 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 FBXO27Q8NI29 283 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 MGARPQ8TDB4 240 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 RNF128Q8TEB7 428 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ZFP90Q8TF47 636 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 XAGE5Q8WWM1 108 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 TMEM234Q8WY98 164 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ST8SIA1Q92185 356 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 OSTF1Q92882 214 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ARL8AQ96BM9 186 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ZBTB9Q96C00 473 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ROPN1LQ96C74 230 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 TLCD1Q96CP7 247 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 NEURL3Q96EH8 262 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 REXO5Q96IC2 774 aaKnown RBP4.28□□□□□ -1.72
CLK3-219ENST00000567805 TEX37Q96LM6 180 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 CCDC115Q96NT0 180 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 WFIKKN1Q96NZ8 548 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 PANX1Q96RD7 426 aa4.28□□□□□ -1.72
CLK3-219ENST00000567805 ZBTB18Q99592 522 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms