RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PEPDP12955 493 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 PRKCAP17252 672 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 BMP7P18075 431 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 POU3F2P20265 443 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-208ENST00000567250 TCEA1P23193 301 aaKnown RBP11.02□□□□□ -0.65
SF3B3-208ENST00000567250 GZMMP51124 257 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 COPZ1P61923 177 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 LIPEQ05469 1076 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 FOXF1Q12946 379 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 QPRTQ15274 297 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 C4orf17Q53FE4 359 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 CHERPQ8IWX8 916 aaKnown RBP11.02□□□□□ -0.65
SF3B3-208ENST00000567250 MICU2Q8IYU8 434 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 GPR119Q8TDV5 335 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 ZNF583Q96ND8 569 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 KCTD14Q9BQ13 255 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-208ENST00000567250 PINK1Q9BXM7 581 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 PIF1Q9H611 641 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 CMTM6Q9NX76 183 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 ADA2Q9NZK5 511 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 CAMK2AQ9UQM7 478 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 SPIN1Q9Y657 262 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-208ENST00000567250 AP4B1Q9Y6B7 739 aa11.02□□□□□ -0.65
SF3B3-208ENST00000567250 PHF3Q92576 2039 aaKnown RBP11.01□□□□□ -0.65
SF3B3-208ENST00000567250 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 H0Y3Z8 333 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 H3BML4 177 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 SYT5O00445 386 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 NME4O00746 187 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 GSTA4O15217 222 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 OIP5O43482 229 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 ZIC3O60481 467 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 GMNNO75496 209 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 GP1BBP13224 206 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 CPN1P15169 458 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 ZNF708P17019 499 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 RYKP34925 604 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 HTR3AP46098 478 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 EPS8Q12929 822 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 SELENBP1Q13228 472 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 BCL2A1Q16548 175 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 C3AR1Q16581 482 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 EIF2S3LQ2VIR3 472 aaKnown RBP11.01□□□□□ -0.65
SF3B3-208ENST00000567250 SPATS1Q496A3 300 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 SLC25A53Q5H9E4 307 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 SAMD4BQ5PRF9 694 aaKnown RBP11.01□□□□□ -0.65
SF3B3-208ENST00000567250 C1QL3Q5VWW1 255 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 C3orf33Q6P1S2 294 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 CCDC80Q76M96 950 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 GRINAQ7Z429 371 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 FGD2Q7Z6J4 655 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 CNOT9Q92600 299 aaKnown RBP11.01□□□□□ -0.65
SF3B3-208ENST00000567250 RNF145Q96MT1 663 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 TIMP4Q99727 224 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 PNPLA3Q9NST1 481 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 TMEM181Q9P2C4 612 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 TESQ9UGI8 421 aaKnown RBP11.01□□□□□ -0.65
SF3B3-208ENST00000567250 SH3BGRL2Q9UJC5 107 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 TINAGQ9UJW2 476 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 BAG5Q9UL15 447 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 SLC5A6Q9Y289 635 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 TENM4Q6N022 2769 aa11.01□□□□□ -0.65
SF3B3-208ENST00000567250 KIAA1549Q9HCM3 1950 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 AHRRA9YTQ3 701 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 E9PLN8 166 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 PYCARD-AS1I3L0S3 204 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 M0QX08 132 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 ETV2O00321 342 aaPredicted RBP11□□□□□ -0.65
SF3B3-208ENST00000567250 CCL21O00585 134 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 WISP2O76076 250 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 MFN2O95140 757 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 OPN1SWP03999 348 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 C8BP07358 591 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 ACVR2AP27037 513 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 GSK3BP49841 420 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 LHX2P50458 406 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 RGS8P57771 180 aaPredicted RBP11□□□□□ -0.65
SF3B3-208ENST00000567250 B3GALT5-AS1P59052 145 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 RPS3AP61247 264 aaKnown RBP11□□□□□ -0.65
SF3B3-208ENST00000567250 RAC1P63000 192 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 KCNC4Q03721 635 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 TMEM44Q2T9K0 475 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 GXYLT1Q4G148 440 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 LRRC23Q53EV4 343 aaPredicted RBP11□□□□□ -0.65
SF3B3-208ENST00000567250 PDSS1Q5T2R2 415 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 ZNF585AQ6P3V2 769 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 B3GNT6Q6ZMB0 384 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 CHMP1BQ7LBR1 199 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 FJX1Q86VR8 437 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 RANBP3LQ86VV4 465 aaPredicted RBP11□□□□□ -0.65
SF3B3-208ENST00000567250 DEFB107AQ8IZN7 70 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 ARHGAP24Q8N264 748 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 OR5M9Q8NGP3 310 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 FBXO27Q8NI29 283 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 PHF10Q8WUB8 498 aaKnown RBP11□□□□□ -0.65
SF3B3-208ENST00000567250 SLC25A43Q8WUT9 341 aaPredicted RBP11□□□□□ -0.65
SF3B3-208ENST00000567250 LZICQ8WZA0 190 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 SMPDL3BQ92485 455 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 PROX1Q92786 737 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms