RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 POU6F2P78424 691 aaPredicted RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 HPCAP84074 193 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 CHRNB3Q05901 458 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 SLC34A1Q06495 639 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 CRYZQ08257 329 aaKnown RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 C17orf67Q0P5P2 114 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 PMPCAQ10713 525 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 GANABQ14697 944 aaKnown RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLK3-218ENST00000566926 EIPR1Q53HC9 387 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 WIPI1Q5MNZ9 446 aaPredicted RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 C1orf185Q5T7R7 199 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 VASNQ6EMK4 673 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 ENPP6Q6UWR7 440 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 SLC16A11Q8NCK7 471 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 PAPD5Q8NDF8 572 aaKnown RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 BBS10Q8TAM1 723 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 SLC38A5Q8WUX1 472 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 PYDC1Q8WXC3 89 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 PIK3R3Q92569 461 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 ABTB1Q969K4 478 aaPredicted RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 SDCCAG3Q96C92 435 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 OR2B2Q9GZK3 357 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 VCX3BQ9H321 246 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 PIGUQ9H490 435 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 PTGES2Q9H7Z7 377 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 CACYBPQ9HB71 228 aaKnown RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 POLE3Q9NRF9 147 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 GMPR2Q9P2T1 348 aaKnown RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 DKKL1Q9UK85 242 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 HRH3Q9Y5N1 445 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 A0A0G2JPF8 293 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 HNRNPCL2B2RXH8 293 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 HNRNPCL3B7ZW38 293 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 SCO2O43819 266 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 KCNK2O95069 426 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 UTS2O95399 124 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 SERPINA1P01009 418 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 NGFRP08138 427 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 NUDT7P0C024 238 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 HNRNPCL4P0DMR1 293 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 OR12D1P0DN82 309 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 NR2F1P10589 423 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 ANPEPP15144 967 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 HPGDP15428 266 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 ATP6V1C1P21283 382 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 CHRNB4P30926 498 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 GAS1P54826 345 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 DSCR4P56555 118 aaPredicted RBP12.19□□□□□ -0.46
CLK3-218ENST00000566926 NUP107P57740 925 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 RPS26P62854 115 aaKnown RBP12.19□□□□□ -0.46
CLK3-218ENST00000566926 DUSP5Q16690 384 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 LRRC23Q53EV4 343 aaPredicted RBP12.19□□□□□ -0.46
CLK3-218ENST00000566926 EXOSC6Q5RKV6 272 aaKnown RBP12.19□□□□□ -0.46
CLK3-218ENST00000566926 SP5Q6BEB4 398 aaPredicted RBP12.19□□□□□ -0.46
CLK3-218ENST00000566926 HEPHL1Q6MZM0 1159 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 CBLL1Q75N03 491 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 EIF3MQ7L2H7 374 aaKnown RBP12.19□□□□□ -0.46
CLK3-218ENST00000566926 C16orf62Q7Z3J2 963 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 YRDCQ86U90 279 aaKnown RBP12.19□□□□□ -0.46
CLK3-218ENST00000566926 ADGRG5Q8IZF4 528 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 PQLC1Q8N2U9 271 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 OR10Q1Q8NGQ4 319 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 NFKBIDQ8NI38 313 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 FAM110BQ8TC76 370 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 CANT1Q8WVQ1 401 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 XAGE5Q8WWM1 108 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 OIT3Q8WWZ8 545 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 MAL2Q969L2 176 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 C16orf58Q96GQ5 468 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 PYURFQ96I23 114 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 OR7D2Q96RA2 312 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 TIMP4Q99727 224 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 TREX2Q9BQ50 279 aaPredicted RBP12.19□□□□□ -0.46
CLK3-218ENST00000566926 TTYH2Q9BSA4 534 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 YIPF4Q9BSR8 244 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 PRDM14Q9GZV8 571 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 TAS2R10Q9NYW0 307 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 TNFRSF10DQ9UBN6 386 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 BAG5Q9UL15 447 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 USP22Q9UPT9 525 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 AURKCQ9UQB9 309 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 SLC6A5Q9Y345 797 aa12.19□□□□□ -0.46
CLK3-218ENST00000566926 H0Y3Z8 333 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 H3BNX3 289 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 SCDO00767 359 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 PGM3O95394 542 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 BCHEP06276 602 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 BMP7P18075 431 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 TBXA2RP21731 343 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 FASP25445 335 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 DPP4P27487 766 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 ARHGAP11BQ3KRB8 267 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 OR5M10Q6IEU7 315 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 LRRC74BQ6ZQY2 392 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 NCCRP1Q6ZVX7 275 aaPredicted RBP12.18□□□□□ -0.46
CLK3-218ENST00000566926 MED12LQ86YW9 2145 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 MISPQ8IVT2 679 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
CLK3-218ENST00000566926 CHDHQ8NE62 594 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms