RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 MARCH5Q9NX47 278 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 TMEM161AQ9NX61 479 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 BCCIPQ9P287 314 aaKnown RBP eCLIP1.09□□□□□ -2.23
SMG1-212ENST00000566328 WDR35Q9P2L0 1181 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 TUBGCP4Q9UGJ1 667 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 LEF1Q9UJU2 399 aaPredicted RBP1.09□□□□□ -2.23
SMG1-212ENST00000566328 SMC3Q9UQE7 1217 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 RNF115Q9Y4L5 304 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 SIP14410 1827 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 CACNA1GO43497 2377 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 GPR179Q6PRD1 2367 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 RELNP78509 3460 aa1.09□□□□□ -2.23
SMG1-212ENST00000566328 KNTC1P50748 2209 aa1.09□□□□□ -2.24
SMG1-212ENST00000566328 GOLGA4Q13439 2230 aaKnown RBP1.09□□□□□ -2.24
SMG1-212ENST00000566328 KIF26AQ9ULI4 1882 aaPredicted RBP1.09□□□□□ -2.24
SMG1-212ENST00000566328 AKAP13Q12802 2813 aa1.09□□□□□ -2.24
SMG1-212ENST00000566328 MTCL1Q9Y4B5 1905 aaKnown RBP1.09□□□□□ -2.24
SMG1-212ENST00000566328 PI4KAP42356 2102 aa1.09□□□□□ -2.24
SMG1-212ENST00000566328 ZNF638Q14966 1978 aaKnown RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 C2orf16Q68DN1 1984 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 VPS13CQ709C8 3753 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 KIAA1671Q9BY89 1806 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 PLXNA3P51805 1871 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 IGLV4-69A0A075B6H9 119 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 A0A1B0GVL5 298 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 ESYT2A0FGR8 921 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 MYBPHLA2RUH7 354 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 VPS37CA5D8V6 355 aaPredicted RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 A8MXE2 369 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 H3BQV1 296 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CCDC188H7C350 402 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CLDN5O00501 218 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 PRRG1O14668 218 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 ERLIN2O94905 339 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 LETM1O95202 739 aaPredicted RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 LYPLA2O95372 231 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 ALPIP09923 528 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CXCL8P10145 99 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 MAGP20916 626 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 IGFBP5P24593 272 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CYP2F1P24903 491 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 PSMB4P28070 264 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 TIA1P31483 386 aaKnown RBP eCLIP1.08□□□□□ -2.24
SMG1-212ENST00000566328 SFNP31947 248 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 RAD52P43351 418 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 OR3A1P47881 315 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 ZNF136P52737 540 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CSTF1Q05048 431 aaKnown RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 SLC3A1Q07837 685 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 DAZ2Q13117 558 aaKnown RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 PDIA5Q14554 519 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 MXD4Q14582 209 aaPredicted RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 SMC1AQ14683 1233 aaKnown RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 ZBTB6Q15916 424 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 PSMD5Q16401 504 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 MAPK6Q16659 721 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 KYNUQ16719 465 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 DCAF4L1Q3SXM0 396 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 SLC39A12Q504Y0 691 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 FAM78AQ5JUQ0 283 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 PPM1LQ5SGD2 360 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 ATF7IP2Q5U623 682 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 TXNRD3NBQ6F5E7 133 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 SPOPLQ6IQ16 392 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 GALNT17Q6IS24 598 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 DCLRE1AQ6PJP8 1040 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 TMEM184AQ6ZMB5 413 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 IL34Q6ZMJ4 242 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 ZFP2Q6ZN57 461 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 GET4Q7L5D6 327 aaPredicted RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 KRT74Q7RTS7 529 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 ZNF720Q7Z2F6 126 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 DNAJB7Q7Z6W7 309 aaPredicted RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 GPBP1Q86WP2 473 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CBWD2Q8IUF1 395 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CREBRFQ8IUR6 639 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 NELFCDQ8IXH7 590 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CSGALNACT2Q8N6G5 542 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 FAM184AQ8NB25 1140 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 TMEM161BQ8NDZ6 487 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 Q8NFD4 153 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CCDC148Q8NFR7 591 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 OR10H4Q8NGA5 316 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 OR5B17Q8NGF7 314 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 URGCPQ8TCY9 931 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 BLOC1S5Q8TDH9 187 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 CCDC12Q8WUD4 166 aaPredicted RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 HEXDCQ8WVB3 486 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 RLN3Q8WXF3 142 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 RSPH1Q8WYR4 309 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 FGF13Q92913 245 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 BIRC7Q96CA5 298 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 DNAJC19Q96DA6 116 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 SENP8Q96LD8 212 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 KCNK16Q96T55 309 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 FAM173AQ9BQD7 235 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 MRPL45Q9BRJ2 306 aaKnown RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 LLPHQ9BRT6 129 aaKnown RBP1.08□□□□□ -2.24
SMG1-212ENST00000566328 CBWD1Q9BRT8 395 aa1.08□□□□□ -2.24
SMG1-212ENST00000566328 FAM213AQ9BRX8 229 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms