RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 Q5PR19 223 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 TUSC5Q8IXB3 177 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 TMCO5AQ8N6Q1 288 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 ATP6V1C2Q8NEY4 427 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 OR8J2Q8NGG1 315 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 ZFP90Q8TF47 636 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 MRGPRX4Q96LA9 322 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 ACTR6Q9GZN1 396 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 TIGARQ9NQ88 270 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 KLHL13Q9P2N7 655 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.32■□□□□ 0.2
USB1-213ENST00000566292 GPR52Q9Y2T5 361 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 DUXAA6NLW8 204 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 GJE1A6NN92 205 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 ANKRD28O15084 1053 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 TM9SF1O15321 606 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 ARHGEF9O43307 516 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 GCM2O75603 506 aaPredicted RBP16.31■□□□□ 0.2
USB1-213ENST00000566292 UGT2B17O75795 530 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 PLAUP00749 431 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 MYZAPP0CAP1 466 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 PABPC4LP0CB38 370 aaKnown RBP16.31■□□□□ 0.2
USB1-213ENST00000566292 PSMB1P20618 241 aaKnown RBP16.31■□□□□ 0.2
USB1-213ENST00000566292 BGNP21810 368 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 SLC1A6P48664 564 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 RPL14P50914 215 aaKnown RBP16.31■□□□□ 0.2
USB1-213ENST00000566292 CCR4P51679 360 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 SELENBP1Q13228 472 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 SKP2Q13309 424 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 QPRTQ15274 297 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 RNPS1Q15287 305 aaKnown RBP16.31■□□□□ 0.2
USB1-213ENST00000566292 ARHGAP11BQ3KRB8 267 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 TNFAIP8L3Q5GJ75 292 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 TFAP2EQ6VUC0 442 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 C20orf204Q6ZNR8 217 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 FCRLAQ7L513 359 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 BIVMQ86UB2 503 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 STK32CQ86UX6 486 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 ANKRD46Q86W74 232 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 WFDC8Q8IUA0 241 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 P3H2Q8IVL5 708 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 TOR1AIP2Q8NFQ8 470 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 OR4A15Q8NGL6 344 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 ZBTB9Q96C00 473 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 REXO5Q96IC2 774 aaKnown RBP16.31■□□□□ 0.2
USB1-213ENST00000566292 PARD6BQ9BYG5 372 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 DPY30Q9C005 99 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 ZNF350Q9GZX5 532 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 OR10A4Q9H209 315 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 OR51I1Q9H343 314 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 FANCFQ9NPI8 374 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 HAO1Q9UJM8 370 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 MKLN1Q9UL63 735 aa16.31■□□□□ 0.2
USB1-213ENST00000566292 IGHV3-15A0A0B4J1V0 119 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 A0A1W2PNR3 127 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 DNAJA2O60884 412 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 STX11O75558 287 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 AK1P00568 194 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 INHBBP09529 407 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 ENPP1P22413 925 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 CBFBQ13951 182 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 TMEM201Q5SNT2 666 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 HEPHL1Q6MZM0 1159 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 GABRG1Q8N1C3 465 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 MIPOL1Q8TD10 442 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 IGFBPL1Q8WX77 278 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 PLPPR2Q96GM1 343 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 THUMPD3Q9BV44 507 aaKnown RBP16.3■□□□□ 0.2
USB1-213ENST00000566292 LAT2Q9GZY6 243 aa16.3■□□□□ 0.2
USB1-213ENST00000566292 ING1Q9UK53 422 aaPredicted RBP16.3■□□□□ 0.2
USB1-213ENST00000566292 USF3Q68DE3 2245 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 PRSS51A0A1B0GVH4 220 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 CYP7B1O75881 506 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 PRKD3O94806 890 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 CPSF4O95639 269 aaKnown RBP16.29■□□□□ 0.2
USB1-213ENST00000566292 OR12D1P0DN82 309 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 UQCRC2P22695 453 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 RAC3P60763 192 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 FUT5Q11128 374 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 TSC22D1Q15714 1073 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 MAPK14Q16539 360 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 TIGD2Q4W5G0 525 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 TNFAIP8L2Q6P589 184 aaPredicted RBP16.29■□□□□ 0.2
USB1-213ENST00000566292 ZNF704Q6ZNC4 412 aaPredicted RBP16.29■□□□□ 0.2
USB1-213ENST00000566292 Q71RC1 249 aaPredicted RBP16.29■□□□□ 0.2
USB1-213ENST00000566292 RAB8BQ92930 207 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 TESCQ96BS2 214 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 S100PBPQ96BU1 408 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 PERPQ96FX8 193 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 NUF2Q9BZD4 464 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 QRSL1Q9H0R6 528 aaKnown RBP16.29■□□□□ 0.2
USB1-213ENST00000566292 GP6Q9HCN6 339 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 PNPOQ9NVS9 261 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 PCDHGB4Q9UN71 923 aa16.29■□□□□ 0.2
USB1-213ENST00000566292 KIAA0513O60268 411 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 BCAS1O75363 584 aaPredicted RBP16.28■□□□□ 0.2
USB1-213ENST00000566292 H6PDO95479 791 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 CSTAP01040 98 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 C1QCP02747 245 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 YES1P07947 543 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms