RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 APLFQ8IW19 511 aaPredicted RBP27.91■■■□□ 2.06
CTCF-203ENST00000566078 AQP11Q8NBQ7 271 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 TOR1AIP2Q8NFQ8 470 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 OR4K5Q8NGD3 323 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 TMEM255BQ8WV15 326 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 SECISBP2Q96T21 854 aaKnown RBP27.91■■■□□ 2.06
CTCF-203ENST00000566078 KLHDC3Q9BQ90 382 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 PRSS27Q9BQR3 290 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 KRT84Q9NSB2 600 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 ANKRD10Q9NXR5 420 aa27.91■■■□□ 2.06
CTCF-203ENST00000566078 PIEZO1Q92508 2521 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 A0A087WUU8 490 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 CHP2O43745 196 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 CBLP22681 906 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 CDC20Q12834 499 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 ZIK1Q3SY52 487 aaPredicted RBP27.9■■■□□ 2.06
CTCF-203ENST00000566078 ALG10BQ5I7T1 473 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 C6orf52Q5T4I8 152 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 ZNF730Q6ZMV8 503 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 GALNT5Q7Z7M9 940 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 GALNT16Q8N428 558 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 LINC00471Q8N535 108 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 ZNF248Q8NDW4 579 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 OR5W2Q8NH69 310 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 ZNF563Q8TA94 476 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 ACOT11Q8WXI4 607 aaPredicted RBP27.9■■■□□ 2.06
CTCF-203ENST00000566078 SELENONQ9NZV5 590 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 PPP4R1LQ9P1A2 415 aa27.9■■■□□ 2.06
CTCF-203ENST00000566078 MITFO75030 526 aaPredicted RBP27.89■■■□□ 2.06
CTCF-203ENST00000566078 NUDT14O95848 222 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 CBFBQ13951 182 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 COL28A1Q2UY09 1125 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 ABHD17BQ5VST6 288 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 PRAMEF20Q5VT98 475 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 WBP2NLQ6ICG8 309 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 OR5M10Q6IEU7 315 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 WDR88Q6ZMY6 472 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 RTL4Q6ZR62 310 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 LSRQ86X29 649 aaPredicted RBP27.89■■■□□ 2.06
CTCF-203ENST00000566078 CYP4Z2PQ8N1L4 340 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 RDH12Q96NR8 316 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 NIPSNAP1Q9BPW8 284 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 SH2D2AQ9NP31 389 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 SDHAF3Q9NRP4 125 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 RAB26Q9ULW5 256 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 AP4B1Q9Y6B7 739 aa27.89■■■□□ 2.06
CTCF-203ENST00000566078 CCL3P10147 92 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 PTNP21246 168 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 RAD23AP54725 363 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 LSM11P83369 360 aaKnown RBP eCLIP27.89■■■□□ 2.05
CTCF-203ENST00000566078 SNTA1Q13424 505 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 NHSL2Q5HYW2 709 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 PGBD2Q6P3X8 592 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 TMEM81Q6P7N7 255 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 ULK3Q6PHR2 472 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 PAQR8Q8TEZ7 354 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 ZNF556Q9HAH1 456 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 STMN3Q9NZ72 180 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 ABI3Q9P2A4 366 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 POLHQ9Y253 713 aa27.89■■■□□ 2.05
CTCF-203ENST00000566078 KLK10O43240 276 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 GASTP01350 101 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 POU2F1P14859 743 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 PGCP20142 388 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 HLCSP50747 726 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 RFX4Q33E94 735 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 CRTC2Q53ET0 693 aaPredicted RBP27.88■■■□□ 2.05
CTCF-203ENST00000566078 GPALPP1Q8IXQ4 340 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 GTPBP3Q969Y2 492 aaKnown RBP27.88■■■□□ 2.05
CTCF-203ENST00000566078 C3orf49Q96BT1 292 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 SGCZQ96LD1 299 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 ADI1Q9BV57 179 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 TOR3AQ9H497 397 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 MGAT4BQ9UQ53 548 aa27.88■■■□□ 2.05
CTCF-203ENST00000566078 ZFHX4Q86UP3 3567 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 ACADSP16219 412 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 UGT2B15P54855 530 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 SLC22A10Q63ZE4 541 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 SLC30A6Q6NXT4 461 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 RRM2BQ7LG56 351 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 DNAJA4Q8WW22 397 aaPredicted RBP27.87■■■□□ 2.05
CTCF-203ENST00000566078 MBOAT4Q96T53 435 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 PAPOLBQ9NRJ5 636 aaKnown RBP27.87■■■□□ 2.05
CTCF-203ENST00000566078 POFUT2Q9Y2G5 429 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 CELSR3Q9NYQ7 3312 aa27.87■■■□□ 2.05
CTCF-203ENST00000566078 PIP5K1CO60331 668 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 MERTKQ12866 999 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 RAPSNQ13702 412 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 SWT1Q5T5J6 900 aaKnown RBP27.86■■■□□ 2.05
CTCF-203ENST00000566078 MBOAT2Q6ZWT7 520 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 TMEM239Q8WW34 195 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 CYGBQ8WWM9 190 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 ZNF524Q96C55 264 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 MPP4Q96JB8 637 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 ING2Q9H160 280 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 CPNE5Q9HCH3 593 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 HRH3Q9Y5N1 445 aa27.86■■■□□ 2.05
CTCF-203ENST00000566078 A6NL46 340 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 B4DXG7 233 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 ADAP00813 363 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms