RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 FREM3P0C091 2139 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 PRAMEF25A6NGN4 478 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 EI24O14681 340 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 MRPS14O60783 128 aaKnown RBP11.52□□□□□ -0.57
SF3B3-206ENST00000565990 GLSO94925 669 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-206ENST00000565990 BCHEP06276 602 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 DBIP07108 87 aaKnown RBP11.52□□□□□ -0.57
SF3B3-206ENST00000565990 PCGF2P35227 344 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 DCTP40126 519 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 TMBIM6P55061 237 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 KCNJ10P78508 379 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 C17orf67Q0P5P2 114 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 FOXO1Q12778 655 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 KLRB1Q12918 225 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 INAQ16352 499 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 BICRALQ6AI39 1079 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 ZNF773Q6PK81 442 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 GALNTL5Q7Z4T8 443 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 MICU2Q8IYU8 434 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 EID3Q8N140 333 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 ZNF786Q8N393 782 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 WDSUB1Q8N9V3 476 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 ZNF527Q8NB42 609 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 OR2M7Q8NG81 312 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 NFKBIDQ8NI38 313 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 HDAC2Q92769 488 aaKnown RBP11.52□□□□□ -0.57
SF3B3-206ENST00000565990 CHID1Q9BWS9 393 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 MFRPQ9BY79 579 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 PIF1Q9H611 641 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 METTL7AQ9H8H3 244 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 HHATLQ9HCP6 504 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 KLHL1Q9NR64 748 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 USP22Q9UPT9 525 aa11.52□□□□□ -0.57
SF3B3-206ENST00000565990 TLN1Q9Y490 2541 aaKnown RBP11.52□□□□□ -0.57
SF3B3-206ENST00000565990 PRRC2CQ9Y520 2896 aaKnown RBP11.52□□□□□ -0.57
SF3B3-206ENST00000565990 ELOVL7A1L3X0 281 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 PINLYPA6NC86 204 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 C5orf58C9J3I9 102 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 M0QX08 132 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 SCDO00767 359 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 MFN2O95140 757 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 ANGPTL1O95841 491 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 THBS1P07996 1170 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 THRBP10828 461 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 CRYBA2P53672 197 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 FGFBP1Q14512 234 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 TIGD3Q6B0B8 471 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 MARCH3Q86UD3 253 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 IFNEQ86WN2 208 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 MISPQ8IVT2 679 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 CMIPQ8IY22 773 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 TEX19Q8NA77 164 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 B4GALNT2Q8NHY0 566 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 DUSP19Q8WTR2 217 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 ISOC1Q96CN7 298 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 BARD1Q99728 777 aaKnown RBP11.51□□□□□ -0.57
SF3B3-206ENST00000565990 RBM4BQ9BQ04 359 aaKnown RBP11.51□□□□□ -0.57
SF3B3-206ENST00000565990 RBM4Q9BWF3 364 aaKnown RBP11.51□□□□□ -0.57
SF3B3-206ENST00000565990 GALNT9Q9HCQ5 603 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 ZFP64Q9NPA5 681 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 SDHAF3Q9NRP4 125 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-206ENST00000565990 GMPR2Q9P2T1 348 aaKnown RBP11.51□□□□□ -0.57
SF3B3-206ENST00000565990 IFT52Q9Y366 437 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 MRPS18CQ9Y3D5 142 aaKnown RBP11.51□□□□□ -0.57
SF3B3-206ENST00000565990 CHST2Q9Y4C5 530 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 WIF1Q9Y5W5 379 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 HSPE1-MOB4S4R3N1 261 aa11.51□□□□□ -0.57
SF3B3-206ENST00000565990 NPIPA5A0A0B4J1W7 369 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 A0A0G2JMM0 328 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 CENPVL1A0A0U1RR11 272 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 A0A1W2PPB8 328 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 A0A1W2PRS3 328 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 SERINC4A6NH21 518 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 KIR3DP1A8MWS1 328 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 B4DXG7 233 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 NPIPA7E9PJI5 369 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 NDUFB5O43674 189 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 SERPINB7O75635 380 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 CBR3O75828 277 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 ALPLP05186 524 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 NPIPA8P0DM63 369 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 NID1P14543 1247 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 HPGDP15428 266 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 ELAVL4P26378 380 aaKnown RBP11.5□□□□□ -0.57
SF3B3-206ENST00000565990 MSX1P28360 303 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 KDELR2P33947 212 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 DNASE1L1P49184 302 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 INPP5JQ15735 1006 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-206ENST00000565990 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 PDZK1Q5T2W1 519 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 PRAMEF20Q5VT98 475 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 THAP5Q7Z6K1 395 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-206ENST00000565990 HIPK1Q86Z02 1210 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 ZDHHC13Q8IUH4 622 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 GRAMD2AQ8IUY3 354 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 PEX5LQ8IYB4 626 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 FADS6Q8N9I5 356 aa11.5□□□□□ -0.57
SF3B3-206ENST00000565990 FAM71CQ8NEG0 241 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms