RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 NKX6-2Q9C056 277 aaPredicted RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 WASH3PC4AMC7 463 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 KPNA3O00505 521 aaPredicted RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 CBSLP0DN79 551 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 CBSP35520 551 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 SYTL3Q4VX76 610 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 ZNF660Q6AZW8 331 aaPredicted RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 LINGO2Q7L985 606 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 BPIFCQ8NFQ6 507 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 CCDC86Q9H6F5 360 aaKnown RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 ASB6Q9NWX5 421 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 PCDHGA5Q9Y5G8 931 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 SERTM1A2A2V5 107 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 TUBAL3A6NHL2 446 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 KDM4EB2RXH2 506 aaPredicted RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 GALR3O60755 368 aaPredicted RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 NDUFS6O75380 124 aaKnown RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 FUT1P19526 365 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 ADH7P40394 386 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 MEOX2P50222 304 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 SP140Q13342 867 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 PIP5KL1Q5T9C9 394 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 AADACL4Q5VUY2 407 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 FAM71E1Q6IPT2 247 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 C1orf94Q6P1W5 598 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 APOOLQ6UXV4 268 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 GINS4Q9BRT9 223 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 HRASLSQ9HDD0 168 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 HINT3Q9NQE9 182 aaKnown RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 SLC22A11Q9NSA0 550 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 FAM170BA6NMN3 283 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 PGRMC2O15173 223 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 ALPPL2P10696 532 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 SEC61A1P61619 476 aaKnown RBP15.13■□□□□ 0.01
LINC00554-201ENST00000564841 SLBPQ14493 270 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC00554-201ENST00000564841 SLC16A13Q7RTY0 426 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 C6orf120Q7Z4R8 191 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 ADIPOR2Q86V24 386 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 C12orf40Q86WS4 652 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 OR2A12Q8NGT7 310 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 VOPP1Q96AW1 172 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 IL17FQ96PD4 163 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 PURGQ9UJV8 347 aaKnown RBP15.13■□□□□ 0.01
LINC00554-201ENST00000564841 OBSL1O75147 1896 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 A0A0G2JN53 185 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 ZNF254O75437 659 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 F12P00748 615 aaPredicted RBP15.13■□□□□ 0.01
LINC00554-201ENST00000564841 ACHEP22303 614 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 PBX2P40425 430 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 SPINT3P49223 89 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 CCR9P51686 369 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 MANFP55145 182 aaKnown RBP15.13■□□□□ 0.01
LINC00554-201ENST00000564841 MPP7Q5T2T1 576 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 GSG1LQ6UXU4 331 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 AHCYL2Q96HN2 611 aaKnown RBP15.13■□□□□ 0.01
LINC00554-201ENST00000564841 ALG8Q9BVK2 526 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 HCAR1Q9BXC0 346 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 TRPC4Q9UBN4 977 aa15.13■□□□□ 0.01
LINC00554-201ENST00000564841 AK6Q9Y3D8 172 aaKnown RBP15.13■□□□□ 0.01
LINC00554-201ENST00000564841 A0A1W2PRQ8 180 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 CPSF4LA6NMK7 179 aaKnown RBP15.12■□□□□ 0.01
LINC00554-201ENST00000564841 LRRN3E7EW58 273 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 ABCD4O14678 606 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 SMAD9O15198 467 aaKnown RBP15.12■□□□□ 0.01
LINC00554-201ENST00000564841 PSMB1P20618 241 aaKnown RBP15.12■□□□□ 0.01
LINC00554-201ENST00000564841 SLC16A1P53985 500 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 H2BFSP57053 126 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 LGALS3BPQ08380 585 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 RPE65Q16518 533 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 PLBD1Q6P4A8 553 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 HSD17B13Q7Z5P4 300 aaPredicted RBP15.12■□□□□ 0.01
LINC00554-201ENST00000564841 OR52I2Q8NH67 350 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 STK35Q8TDR2 534 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 ZG16BQ96DA0 208 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 LRIG1Q96JA1 1093 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 LRRN3Q9H3W5 708 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 BABAM2Q9NXR7 383 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 CTSFQ9UBX1 484 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 ACAD8Q9UKU7 415 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 EDARQ9UNE0 448 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 SLC6A5Q9Y345 797 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 TRBV23-1A0A0A0MS06 115 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 UBL3O95164 117 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 NFATC1O95644 943 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 POP4O95707 220 aaKnown RBP15.12■□□□□ 0.01
LINC00554-201ENST00000564841 IMPA1P29218 277 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 MMP15P51511 669 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 PRKAG1P54619 331 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 PRR5P85299 388 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 FGL1Q08830 312 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 HFEQ30201 348 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 DCAF12L2Q5VW00 463 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 OR7E24Q6IFN5 339 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 ZNF600Q6ZNG1 722 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 OR10H4Q8NGA5 316 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 OR5W2Q8NH69 310 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 GNPDA2Q8TDQ7 276 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 NSMAFQ92636 917 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 RSPRY1Q96DX4 576 aa15.12■□□□□ 0.01
LINC00554-201ENST00000564841 BTBD1Q9H0C5 482 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms