RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 SERINC4A6NH21 518 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 TM9SF1O15321 606 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 SKAP2O75563 359 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 UBL4AP11441 157 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 SFTPDP35247 375 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 RPL14P50914 215 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 ABCE1P61221 599 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 TXNL4AP83876 142 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 DPY19L1Q2PZI1 675 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 PGS1Q32NB8 556 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 Q5PR19 223 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 ATAD3BQ5T9A4 648 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 ADAM5Q6NVV9 412 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 FCRLAQ7L513 359 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 CROCCP2Q86T23 111 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 GABRG1Q8N1C3 465 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF611Q8N823 705 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 ZFP90Q8TF47 636 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 TMEM234Q8WY98 164 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 ROBO4Q8WZ75 1007 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 TMEM204Q9BSN7 226 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 CXorf56Q9H5V9 222 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF395Q9H8N7 513 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 AKTIPQ9H8T0 292 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 SERINC1Q9NRX5 453 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 KLHL9Q9P2J3 617 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 RAP2CQ9Y3L5 183 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 KCNE3Q9Y6H6 103 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 ANKRD28O15084 1053 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 RGS16O15492 202 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 CNOT4O95628 575 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 FESP07332 822 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 CREB1P16220 341 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 PGCP20142 388 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 UQCRC2P22695 453 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 SLC7A1P30825 629 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 CLNS1AP54105 237 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 LTBQ06643 244 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 SFRP5Q5T4F7 317 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 HEPHL1Q6MZM0 1159 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 CLEC9AQ6UXN8 241 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 TFAP2EQ6VUC0 442 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF704Q6ZNC4 412 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 EIF3MQ7L2H7 374 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 YTHDF3Q7Z739 585 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 TUSC5Q8IXB3 177 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 TMEM171Q8WVE6 324 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 IGFBPL1Q8WX77 278 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 TESCQ96BS2 214 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 HS3ST6Q96QI5 342 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 SRXN1Q9BYN0 137 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 DPY30Q9C005 99 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 C12orf49Q9H741 205 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 BCO1Q9HAY6 547 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 ACER3Q9NUN7 267 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF701Q9NV72 531 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 HAO1Q9UJM8 370 aa10.85□□□□□ -0.67
GTF3C1-204ENST00000564664 NPIPA5A0A0B4J1W7 369 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF724A8MTY0 619 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 NPIPA7E9PJI5 369 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 HS3ST1O14792 307 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 OIP5O43482 229 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 GCM2O75603 506 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 HEXAP06865 529 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 NPIPA8P0DM63 369 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 ENPP1P22413 925 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 IL32P24001 234 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 SHC1P29353 583 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 SOAT1P35610 550 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 APOBEC1P41238 236 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 CLK1P49759 484 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 CSNK2A1P68400 391 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 LRRC74AQ0VAA2 488 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 ITGADQ13349 1161 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 PDK3Q15120 406 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 QPRTQ15274 297 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 CHI3L2Q15782 390 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 TOMM34Q15785 309 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 KRT71Q3SY84 523 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 PDZK1Q5T2W1 519 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 OR4F3Q6IEY1 312 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 C3orf33Q6P1S2 294 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 DNAJC14Q6Y2X3 702 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 C16orf62Q7Z3J2 963 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 P2RY8Q86VZ1 359 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF614Q8N883 585 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF781Q8N8C0 355 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 OR5D16Q8NGK9 328 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 OR5AK3PQ8NH89 298 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 ABHD3Q8WU67 409 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 SLC25A43Q8WUT9 341 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 PMM1Q92871 262 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 KISS1RQ969F8 398 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 PLPPR2Q96GM1 343 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 COX4I2Q96KJ9 171 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 SLC35G5Q96KT7 338 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 KLHDC3Q9BQ90 382 aa10.84□□□□□ -0.67
GTF3C1-204ENST00000564664 THUMPD3Q9BV44 507 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms