RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 GMFGO60234 142 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 SLC7A1P30825 629 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 CLK1P49759 484 aaKnown RBP13.29□□□□□ -0.28
SNX29-203ENST00000564111 AGFG1P52594 562 aaKnown RBP13.29□□□□□ -0.28
SNX29-203ENST00000564111 UFM1P61960 85 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 QPRTQ15274 297 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 PAMR1Q6UXH9 720 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 LRRC74BQ6ZQY2 392 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 CDC20BQ86Y33 519 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 MIER2Q8N344 545 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 FAM71CQ8NEG0 241 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 XAGE5Q8WWM1 108 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 ZHX1-C8orf76Q96EF9 292 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 SERHL2Q9H4I8 314 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 KCNE3Q9Y6H6 103 aa13.29□□□□□ -0.28
SNX29-203ENST00000564111 PCNX3Q9H6A9 2034 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 HMGB1P1B2RPK0 211 aaPredicted RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 RFXANKO14593 260 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 TNFSF11O14788 317 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 UBDO15205 165 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 DNPH1O43598 174 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 CGAP01215 116 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 RAF1P04049 648 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 OR12D1P0DN82 309 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 EPHA3P29320 983 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 DNAJA1P31689 397 aaKnown RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 APOBEC1P41238 236 aaKnown RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 CCR4P51679 360 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 MAP2K6P52564 334 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 RPS26P62854 115 aaKnown RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 CSNK2A1P68400 391 aaPredicted RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 TESK1Q15569 626 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 ZNF239Q16600 458 aaKnown RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 GPAT3Q53EU6 434 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 TMEM201Q5SNT2 666 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 PPP4R4Q6NUP7 873 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 VWA1Q6PCB0 445 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 ANKRD46Q86W74 232 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 ARFGAP2Q8N6H7 521 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 ZNF75CPQ92670 426 aaPredicted RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 OSTF1Q92882 214 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 SDR39U1Q9NRG7 319 aaPredicted RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 P2RX2Q9UBL9 471 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 CENPEQ02224 2701 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 CRYBG3Q68DQ2 2970 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 UGT2B17O75795 530 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 KCNJ5P48544 419 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 TYW3Q6IPR3 259 aaKnown RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 TNFAIP8L2Q6P589 184 aaPredicted RBP13.28□□□□□ -0.28
SNX29-203ENST00000564111 HDXQ7Z353 690 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 RNF128Q8TEB7 428 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 CCDC28BQ9BUN5 200 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 HDHD5Q9BXW7 423 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 ARMC7Q9H6L4 198 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 ITGB1BP2Q9UKP3 347 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
SNX29-203ENST00000564111 MYO9AB2RTY4 2548 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 NPIPA5A0A0B4J1W7 369 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 A0A0J9YW62 118 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 FAM234BA2RU67 622 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 SHISA8B8ZZ34 492 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 NPIPA7E9PJI5 369 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 FAAHO00519 579 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 ANP32DO95626 131 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 DBIP07108 87 aaKnown RBP13.27□□□□□ -0.28
SNX29-203ENST00000564111 NPIPA8P0DM63 369 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 KITP10721 976 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 CRYGSP22914 178 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 UGT2B10P36537 528 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 RAC3P60763 192 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 DYDC1Q8WWB3 177 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 MTHFD2LQ9H903 347 aaPredicted RBP13.27□□□□□ -0.28
SNX29-203ENST00000564111 KLHL9Q9P2J3 617 aa13.27□□□□□ -0.28
SNX29-203ENST00000564111 POLR3GO15318 223 aaPredicted RBP13.27□□□□□ -0.29
SNX29-203ENST00000564111 TMCC2O75069 709 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 PRKD3O94806 890 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 PPIBP23284 216 aaKnown RBP13.27□□□□□ -0.29
SNX29-203ENST00000564111 PHC1P78364 1004 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 PRAMEF8Q5VWM4 474 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 PRAMEF7Q5VXH5 474 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 FRRS1Q6ZNA5 592 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 ZNF621Q6ZSS3 439 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 STEAP2Q8NFT2 490 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 RFWD2Q8NHY2 731 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 LINC01560Q8TB33 94 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 WDR60Q8WVS4 1066 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 ALPK1Q96QP1 1244 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 MED18Q9BUE0 208 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 THUMPD3Q9BV44 507 aaKnown RBP13.27□□□□□ -0.29
SNX29-203ENST00000564111 OPN3Q9H1Y3 402 aaPredicted RBP13.27□□□□□ -0.29
SNX29-203ENST00000564111 CXXC4Q9H2H0 198 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 WDR55Q9H6Y2 383 aaPredicted RBP13.27□□□□□ -0.29
SNX29-203ENST00000564111 KLHL13Q9P2N7 655 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 MKLN1Q9UL63 735 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 GPR52Q9Y2T5 361 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 CREBBPQ92793 2442 aa13.27□□□□□ -0.29
SNX29-203ENST00000564111 ANKRD17O75179 2603 aaKnown RBP13.27□□□□□ -0.29
SNX29-203ENST00000564111 ANKHD1Q8IWZ3 2542 aaKnown RBP13.26□□□□□ -0.29
SNX29-203ENST00000564111 NUP214P35658 2090 aaPredicted RBP13.26□□□□□ -0.29
SNX29-203ENST00000564111 GOLGA8QA0A0J9YX86 632 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms