RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 OXSMQ9NWU1 459 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 PRSS50Q9UI38 385 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 CDC42EP3Q9UKI2 254 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 B3GALT5Q9Y2C3 310 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 CARD8Q9Y2G2 431 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 PTGDR2Q9Y5Y4 395 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 CADP27708 2225 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 IGHV4-30-2A0A087WSY4 118 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 ZNF724A8MTY0 619 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 ABCD4O14678 606 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 SSX4O60224 188 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 CYTIPO60759 359 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 PGM3O95394 542 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 F12P00748 615 aaPredicted RBP16.51■□□□□ 0.23
NME3-204ENST00000563498 GGT1P19440 569 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 SLC7A1P30825 629 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 C21orf58P58505 322 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 RASGEF1BQ0VAM2 473 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 LASP1Q14847 261 aaKnown RBP16.51■□□□□ 0.23
NME3-204ENST00000563498 TOMM34Q15785 309 aaPredicted RBP16.51■□□□□ 0.23
NME3-204ENST00000563498 RFTN2Q52LD8 501 aaPredicted RBP16.51■□□□□ 0.23
NME3-204ENST00000563498 CDC73Q6P1J9 531 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 HOMEZQ8IX15 550 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 MNS1Q8NEH6 495 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 OR2T11Q8NH01 316 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 CLHC1Q8NHS4 586 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 CHMP6Q96FZ7 201 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 TMEM160Q9NX00 188 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 BAIAP2L1Q9UHR4 511 aa16.51■□□□□ 0.23
NME3-204ENST00000563498 IGHV3-15A0A0B4J1V0 119 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 OR5H1A6NKK0 313 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 NPIPB9F8W1W9 429 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 GTPBP1O00178 669 aaKnown RBP16.5■□□□□ 0.23
NME3-204ENST00000563498 AZIN1O14977 448 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 PHF1O43189 567 aaPredicted RBP16.5■□□□□ 0.23
NME3-204ENST00000563498 GPRIN2O60269 458 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 PLIN3O60664 434 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 IGHV1-2P23083 117 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 NUDT6P53370 316 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 ATP12AP54707 1039 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 RPL38P63173 70 aaKnown RBP16.5■□□□□ 0.23
NME3-204ENST00000563498 TMEM249Q2WGJ8 235 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 ARL13AQ5H913 290 aaPredicted RBP16.5■□□□□ 0.23
NME3-204ENST00000563498 DCST2Q5T1A1 773 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.5■□□□□ 0.23
NME3-204ENST00000563498 ATP6V1C2Q8NEY4 427 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 OR5W2Q8NH69 310 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 PSMA8Q8TAA3 256 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 ARL8AQ96BM9 186 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 TNFRSF13CQ96RJ3 184 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 ACTRT3Q9BYD9 372 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 NPAP1Q9NZP6 1156 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 TBK1Q9UHD2 729 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 MGAT4BQ9UQ53 548 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 DTNAQ9Y4J8 743 aa16.5■□□□□ 0.23
NME3-204ENST00000563498 A0A1W2PPM1 405 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 ELOA3DA6NLF2 546 aaPredicted RBP16.49■□□□□ 0.23
NME3-204ENST00000563498 LSM1O15116 133 aaKnown RBP16.49■□□□□ 0.23
NME3-204ENST00000563498 SMAD9O15198 467 aaKnown RBP16.49■□□□□ 0.23
NME3-204ENST00000563498 EIF4E2O60573 245 aaKnown RBP16.49■□□□□ 0.23
NME3-204ENST00000563498 KRT16P08779 473 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 CPA3P15088 417 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 TTKP33981 857 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 HPCAL1P37235 193 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 RPL3P39023 403 aaKnown RBP16.49■□□□□ 0.23
NME3-204ENST00000563498 CCT5P48643 541 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 VLDLRP98155 873 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 LOXL1Q08397 574 aaPredicted RBP16.49■□□□□ 0.23
NME3-204ENST00000563498 ELOA3BQ3SY89 546 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 LIPMQ5VYY2 423 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 C11orf71Q6IPW1 123 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 C3orf33Q6P1S2 294 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 CLEC2AQ6UVW9 174 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 TMEM108Q6UXF1 575 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 GALNT5Q7Z7M9 940 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 TOR1AIP2Q8NFQ8 470 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 ELOA3Q8NG57 546 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 OR56A1Q8NGH5 318 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 ADAMTS15Q8TE58 950 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 ZNF75CPQ92670 426 aaPredicted RBP16.49■□□□□ 0.23
NME3-204ENST00000563498 TRMOQ9BU70 441 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 CACNG6Q9BXT2 260 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 TUBB1Q9H4B7 451 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 CBLN4Q9NTU7 201 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 ATP6V1HQ9UI12 483 aa16.49■□□□□ 0.23
NME3-204ENST00000563498 NPIPA5A0A0B4J1W7 369 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 A0A1W2PNR3 127 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 FAM234BA2RU67 622 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 NPIPA7E9PJI5 369 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 ZNF264O43296 627 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 CHEK2O96017 543 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 NPIPA8P0DM63 369 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 BCKDHAP12694 445 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 EFNA1P20827 205 aaPredicted RBP16.48■□□□□ 0.23
NME3-204ENST00000563498 EDNRAP25101 427 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 CRHR1P34998 444 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 IRX1P78414 480 aaPredicted RBP16.48■□□□□ 0.23
NME3-204ENST00000563498 CBFBQ13951 182 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 QPRTQ15274 297 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 KANK2Q63ZY3 851 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms