RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 KPTNQ9Y664 436 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 CLUHO75153 1309 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 C1orf232A0A0U1RR37 186 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SMIM28A0A1B0GU29 152 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 GRID2IPA4D2P6 1211 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 YJEFN3A6XGL0 299 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 ZNF732B4DXR9 585 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 E9PQ18 207 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 TMEM178BH3BS89 294 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 K7ESM1 405 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 RNASET2O00584 256 aaKnown RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SIVA1O15304 175 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 GPR137BO60478 399 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 PRKRAO75569 313 aaKnown RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 OR2J3O76001 311 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 RPSAP08865 295 aaKnown RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 ELFN1P0C7U0 828 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 CD59P13987 128 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 PROZP22891 400 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 OTX1P32242 354 aaPredicted RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SFTPDP35247 375 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 AVPR1AP37288 418 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 MAGEA5P43359 124 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 UQCRFS1P47985 274 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 GLUD2P49448 558 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 CDH12P55289 794 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 PLP1P60201 277 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 DSTNP60981 165 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 RPL10AP62906 217 aaKnown RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 EWSR1Q01844 656 aaKnown RBP eCLIP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 MYL5Q02045 173 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 STX3Q13277 289 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 CHI3L2Q15782 390 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 DUOXA1Q1HG43 343 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 ZNF699Q32M78 642 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SPATS1Q496A3 300 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 CCDC14Q49A88 953 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 TIGD2Q4W5G0 525 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SFT2D3Q587I9 215 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 CDKL4Q5MAI5 379 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 PAPPA-AS1Q5QFB9 102 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 LGSNQ5TDP6 509 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 OR52W1Q6IF63 320 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 OR4A47Q6IF82 309 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 FAM71F2Q6NXP2 309 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 Q7L0L9 218 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 UNC93AQ86WB7 457 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 LRTM2Q8N967 370 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 RELL2Q8NC24 303 aaPredicted RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 NOA1Q8NC60 698 aaKnown RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 FBXL13Q8NEE6 735 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 OR9G4Q8NGQ1 327 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 OR14A16Q8NHC5 309 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 CCDC26Q8TAB7 109 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SLC38A5Q8WUX1 472 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 NELFBQ8WX92 580 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 IRGQQ8WZA9 623 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 ZNF689Q96CS4 500 aaPredicted RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 BPIFA2Q96DR5 249 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 FAM122AQ96E09 287 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 CPB2Q96IY4 423 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 LMLNQ96KR4 655 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 FOXN4Q96NZ1 517 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 TSSK3Q96PN8 268 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 UHRF2Q96PU4 802 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 S1PR3Q99500 378 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 FUCA2Q9BTY2 467 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 PARD6GQ9BYG4 376 aaPredicted RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SDCBP2Q9H190 292 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 LPAR2Q9HBW0 351 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SPAG4Q9NPE6 437 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 PLEK2Q9NYT0 353 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 STOX2Q9P2F5 926 aaPredicted RBP4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 SIX4Q9UIU6 781 aa4.66□□□□□ -1.66
VPS35P1-201ENST00000563400 IQANK1A0A1B0GTG1 560 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 A0A1W2PPE3 182 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 A0A1W2PRB8 838 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 PRSS37A4D1T9 235 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 TMEM150BA6NC51 233 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF840PA6NDX5 716 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF99A8MXY4 864 aaPredicted RBP4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 OVOL3O00110 214 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ARPC2O15144 300 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 LATO43561 262 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 SRPX2O60687 465 aaPredicted RBP4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 STK17BO94768 372 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 BMP10O95393 424 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 BRI3O95415 125 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ZBTB11O95625 1053 aaPredicted RBP4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 SERPINE2P07093 398 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 GSTA2P09210 222 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 CTSAP10619 480 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ACADSP16219 412 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 GPX3P22352 226 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ZFP36P26651 326 aaKnown RBP4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 GTF2E2P29084 291 aaKnown RBP4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 UGT1A5P35504 534 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC1A2P43004 574 aa4.65□□□□□ -1.67
VPS35P1-201ENST00000563400 ACOT2P49753 483 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms