RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 IL7P13232 177 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 POU3F3P20264 500 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 NR4A2P43354 598 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 EMP3P54852 163 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 PDE7AQ13946 482 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 SELPLGQ14242 412 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 SYPL1Q16563 259 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 RPS26P11Q5JNZ5 115 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 FAM205BPQ63HN1 556 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 PAPD4Q6PIY7 484 aaKnown RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 CHERPQ8IWX8 916 aaKnown RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 TSEN15Q8WW01 171 aaKnown RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 PATE1Q8WXA2 126 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ERMAPQ96PL5 475 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 TAS2R10Q9NYW0 307 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 A6NCN8 305 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 A6NIZ1 184 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 M0R3H8 397 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ST8SIA5O15466 376 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 FARS2O95363 451 aaKnown RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 FCER2P06734 321 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 CD36P16671 472 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 DNASE1L1P49184 302 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 RAP1BP61224 184 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 RAP1AP62834 184 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 DEFA5Q01523 94 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 EXOSC7Q15024 291 aaKnown RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 MAPK14Q16539 360 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 MEP1AQ16819 746 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 FAM209BQ5JX69 171 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 DHRS4L2Q6PKH6 230 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 COMTD1Q86VU5 262 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 NRMQ8IXM6 262 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 GATSQ8NAP1 163 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 DTWD2Q8NBA8 298 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 C15orf40Q8WUR7 153 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 FER1L6-AS2Q96M78 137 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 USB1Q9BQ65 265 aaKnown RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 LIN7BQ9HAP6 207 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 COPZ2Q9P299 210 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 M0R296 226 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 NUPL2O15504 423 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 HOXB1P14653 301 aaPredicted RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 MSX1P28360 303 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 CDKN2CP42773 168 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 HLA-BQ31612 363 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 WDR5BQ86VZ2 330 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 FBXL6Q8N531 539 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 CLEC1AQ8NC01 280 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 CPNE2Q96FN4 548 aaPredicted RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 KCTD7Q96MP8 289 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 CHCHD6Q9BRQ6 235 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 TTYH1Q9H313 450 aaPredicted RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 CPNE5Q9HCH3 593 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 PPP1R14DQ9NXH3 145 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 SOCS2O14508 198 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 ARHGAP33O14559 1287 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 SIGLEC6O43699 453 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 ZNF84P51523 738 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 LSM3P62310 102 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 CRTC2Q53ET0 693 aaPredicted RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 TMEM225Q6GV28 225 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 HAGHLQ6PII5 290 aaPredicted RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 CCBE1Q6UXH8 406 aaPredicted RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 SPRED1Q7Z699 444 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 SLC38A6Q8IZM9 456 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 MORN4Q8NDC4 146 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 OR2A14Q96R47 310 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 KCNS3Q9BQ31 491 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 LDAHQ9H6V9 325 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 PLEKHA1Q9HB21 404 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 A0A0A6YYD5 115 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 TRBV11-1A0A0K0K1C0 115 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 MYOCOSA0A1B0GUC4 107 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 OR6C70A6NIJ9 312 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 HCRTR1O43613 425 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 FMO6PO60774 539 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 CLPXO76031 633 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 FKBP2P26885 142 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 LIMK1P53667 647 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 ACTA2P62736 377 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 ACTG2P63267 376 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 RASGEF1BQ0VAM2 473 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 BNIP3Q12983 259 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 BCL2A1Q16548 175 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 GPR139Q6DWJ6 353 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 FAM111BQ6SJ93 734 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 PIWIL3Q7Z3Z3 882 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 ZBTB46Q86UZ6 589 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 CA13Q8N1Q1 262 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 TCTEX1D2Q8WW35 142 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 ADAD1Q96M93 576 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 ATP13A2Q9NQ11 1180 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 PPIEQ9UNP9 301 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 PCDHGA5Q9Y5G8 931 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 PATJQ8NI35 1801 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 SERINC4A6NH21 518 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 ZNF264O43296 627 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 LCMT2O60294 686 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 PLOD3O60568 738 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms