RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CIB4A0PJX0 185 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 SLU7O95391 586 aaKnown RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 GSTA1P08263 222 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 SNRPAP09012 282 aaKnown RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 PABPC4LP0CB38 370 aaKnown RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 PYGBP11216 843 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 PRKCAP17252 672 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 SDC1P18827 310 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 CCNA2P20248 432 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 NTF4P34130 210 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 PKNOX1P55347 436 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 RPS26P62854 115 aaKnown RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 RPL38P63173 70 aaKnown RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 SLC25A3Q00325 362 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 LOXL1Q08397 574 aaPredicted RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 NRF1Q16656 503 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 GALNTL6Q49A17 601 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 VPS26BQ4G0F5 336 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 ZNF433Q8N7K0 673 aaPredicted RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 CDRT4Q8N9R6 151 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 OR52E4Q8NGH9 312 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 FAM110BQ8TC76 370 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 GPR119Q8TDV5 335 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 ACTRT2Q8TDY3 377 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 PPCDCQ96CD2 204 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 MSI2Q96DH6 328 aaKnown RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 FBXO17Q96EF6 278 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 DHRS9Q9BPW9 319 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 GRPEL1Q9HAV7 217 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 ZCCHC3Q9NUD5 404 aaKnown RBP10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 EMCNQ9ULC0 261 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 PKD1L1Q8TDX9 2849 aa10.28□□□□□ -0.76
NSMCE1-202ENST00000561960 IGHV4-61A0A0C4DH41 118 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 LRP5LA4QPB2 252 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 OR5H1A6NKK0 313 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 TMEM233B4DJY2 109 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 ATP6V1G2-DDX39BF2Z307 99 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 HMGN2P05204 90 aaKnown RBP10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 LINC00032P0C843 101 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 CDH2P19022 906 aaPredicted RBP10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 USF1P22415 310 aaPredicted RBP10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 CD40P25942 277 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 LSM11P83369 360 aaKnown RBP eCLIP10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 TP53BP2Q13625 1128 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 QPRTQ15274 297 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 TDRPQ86YL5 185 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 OR7A2PQ8NGA2 310 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 OR5D16Q8NGK9 328 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 FAM120BQ96EK7 910 aaKnown RBP10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 L3HYPDHQ96EM0 354 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 PRR14Q9BWN1 585 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 SIRT3Q9NTG7 399 aaPredicted RBP10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 TAS2R7Q9NYW3 318 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 KLHL9Q9P2J3 617 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 KCNS2Q9ULS6 477 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 ICAM5Q9UMF0 924 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 NFU1Q9UMS0 254 aa10.27□□□□□ -0.77
NSMCE1-202ENST00000561960 A0A1W2PPM1 405 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 ELOA3DA6NLF2 546 aaPredicted RBP10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 G3V2L1 256 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 CYTIPO60759 359 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 BCAS1O75363 584 aaPredicted RBP10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 SLITRK5O94991 958 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 NGFRP08138 427 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 TFPIP10646 304 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 SLC25A16P16260 332 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 DDX5P17844 614 aaKnown RBP10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 COX5AP20674 150 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 ATP6V1C1P21283 382 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 IL2RGP31785 369 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 P2RX1P51575 399 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 MLC1Q15049 377 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 ELOA3BQ3SY89 546 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 TIGD2Q4W5G0 525 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 TIMM23BQ5SRD1 257 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 DCST2Q5T1A1 773 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 PDZK1Q5T2W1 519 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 LIPMQ5VYY2 423 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 FAM166AQ6J272 317 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 TMEM108Q6UXF1 575 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 CCDC103Q8IW40 242 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 NOA1Q8NC60 698 aaKnown RBP10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 ELOA3Q8NG57 546 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 OR6Y1Q8NGX8 325 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 CEP70Q8NHQ1 597 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 AGR3Q8TD06 166 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 HOXB13Q92826 284 aaPredicted RBP10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 SORCS2Q96PQ0 1159 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 THUMPD3Q9BV44 507 aaKnown RBP10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 BTBD2Q9BX70 525 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 OR11A1Q9GZK7 315 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 REEP4Q9H6H4 257 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 BCO1Q9HAY6 547 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 SIRT5Q9NXA8 310 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 CCL27Q9Y4X3 112 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 SLC25A15Q9Y619 301 aa10.26□□□□□ -0.77
NSMCE1-202ENST00000561960 TGP01266 2768 aa10.25□□□□□ -0.77
NSMCE1-202ENST00000561960 A0A087WUV0 522 aaPredicted RBP10.25□□□□□ -0.77
NSMCE1-202ENST00000561960 CCDC151A5D8V7 595 aa10.25□□□□□ -0.77
NSMCE1-202ENST00000561960 GJE1A6NN92 205 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms