RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 FAF1Q9UNN5 650 aaPredicted RBP10.35□□□□□ -0.75
USP3-220ENST00000561381 CADP27708 2225 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 A0A1W2PNR3 127 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 INAFM1C9JVW0 142 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 NPIPB9F8W1W9 429 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 GTPBP1O00178 669 aaKnown RBP10.34□□□□□ -0.75
USP3-220ENST00000561381 HSPA4LO95757 839 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 PAX1P15863 534 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 CREB1P16220 341 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 PRKCAP17252 672 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 EDNRAP25101 427 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 MAPK1P28482 360 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 ATP12AP54707 1039 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 ATP5J2P56134 94 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 HBA1P69905 142 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 TAB1Q15750 504 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 ATP6AP1LQ52LC2 224 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 FCRLAQ7L513 359 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 CLEC4FQ8N1N0 589 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 ZNF611Q8N823 705 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 FNDC5Q8NAU1 212 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 ZNF527Q8NB42 609 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 STEAP2Q8NFT2 490 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 OR56A1Q8NGH5 318 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 TCP10LQ8TDR4 215 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 NEUROG1Q92886 237 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 CPNE4Q96A23 557 aaPredicted RBP10.34□□□□□ -0.75
USP3-220ENST00000561381 REXO5Q96IC2 774 aaKnown RBP10.34□□□□□ -0.75
USP3-220ENST00000561381 OR7D2Q96RA2 312 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 HOXD1Q9GZZ0 328 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 OR10A4Q9H209 315 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 SERHL2Q9H4I8 314 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 CXorf56Q9H5V9 222 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 EML4Q9HC35 981 aaKnown RBP10.34□□□□□ -0.75
USP3-220ENST00000561381 TIGARQ9NQ88 270 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 ING1Q9UK53 422 aaPredicted RBP10.34□□□□□ -0.75
USP3-220ENST00000561381 LAMP3Q9UQV4 416 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 DTNAQ9Y4J8 743 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 ACTL7BQ9Y614 415 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 GPC6Q9Y625 555 aaPredicted RBP10.34□□□□□ -0.75
USP3-220ENST00000561381 HIVEP2P31629 2446 aa10.34□□□□□ -0.75
USP3-220ENST00000561381 CENPVL1A0A0U1RR11 272 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 ESPNB1AK53 854 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 ZNF814B7Z6K7 855 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 C9JVG2 144 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 H3BNH8 94 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 CLOCKO15516 846 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 CFLARO15519 480 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 PRKD3O94806 890 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 ADAP00813 363 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 SOD3P08294 240 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 PABPC4LP0CB38 370 aaKnown RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 G6PDP11413 515 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 DDX5P17844 614 aaKnown RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 ADH6P28332 368 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 RPL3P39023 403 aaKnown RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 CCR4P51679 360 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 SUMO3P55854 103 aaPredicted RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 TNK1Q13470 666 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 QPRTQ15274 297 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 RNPS1Q15287 305 aaKnown RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 PDZK1Q5T2W1 519 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 SFRP5Q5T4F7 317 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 SEZ6L2Q6UXD5 910 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 LSRQ86X29 649 aaPredicted RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 RIMKLAQ8IXN7 391 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 CLECL1Q8IZS7 167 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 TMCO5AQ8N6Q1 288 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 OR5W2Q8NH69 310 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 ZFP90Q8TF47 636 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 TUBGCP3Q96CW5 907 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 SDF2Q99470 211 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 TACO1Q9BSH4 297 aaKnown RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 QRSL1Q9H0R6 528 aaKnown RBP10.33□□□□□ -0.76
USP3-220ENST00000561381 FANCFQ9NPI8 374 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 PRSS50Q9UI38 385 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 KCNE5Q9UJ90 142 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 ZANQ9Y493 2812 aa10.33□□□□□ -0.76
USP3-220ENST00000561381 GJE1A6NN92 205 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 ZNF264O43296 627 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 LYPLA1O75608 230 aaPredicted RBP10.32□□□□□ -0.76
USP3-220ENST00000561381 CYP7B1O75881 506 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 H6PDO95479 791 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 YES1P07947 543 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 UBL4AP11441 157 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 PRPS1L1P21108 318 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 IL32P24001 234 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 SOAT1P35610 550 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 CASP9P55211 416 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 RPS4XP62701 263 aaKnown RBP10.32□□□□□ -0.76
USP3-220ENST00000561381 SELENBP1Q13228 472 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 GPR68Q15743 365 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 PGS1Q32NB8 556 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 LSM12Q3MHD2 195 aaKnown RBP10.32□□□□□ -0.76
USP3-220ENST00000561381 NCMAPQ5T1S8 102 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 MAPK1IP1LQ8NDC0 245 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 SFXN5Q8TD22 340 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 MRGPRX4Q96LA9 322 aa10.32□□□□□ -0.76
USP3-220ENST00000561381 PPP1R36Q96LQ0 422 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms