RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 ISYNA1Q9NPH2 558 aa23.1■■□□□ 1.29
SHF-208ENST00000560734 COL5A1P20908 1838 aaPredicted RBP23.1■■□□□ 1.29
SHF-208ENST00000560734 TMEM129A0AVI4 362 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 TO15178 435 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 SIGLEC6O43699 453 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 HCN1O60741 890 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 PTP4A3O75365 173 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 NADKO95544 446 aaPredicted RBP23.09■■□□□ 1.29
SHF-208ENST00000560734 ONECUT2O95948 504 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 IGF2P01344 180 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 TBXA2RP21731 343 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 GADD45AP24522 165 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 NCS1P62166 190 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 ALG10BQ5I7T1 473 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 CLEC12AQ5QGZ9 265 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 FNDC7Q5VTL7 733 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 GATAD2AQ86YP4 633 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 KBTBD8Q8NFY9 601 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 OR6Q1Q8NGQ2 317 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 OR4C3Q8NH37 302 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 DPH1Q9BZG8 443 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 RPS6KB2Q9UBS0 482 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 EXOSC1Q9Y3B2 195 aaKnown RBP23.09■■□□□ 1.29
SHF-208ENST00000560734 SPTBP11277 2137 aa23.09■■□□□ 1.29
SHF-208ENST00000560734 SULT1C4O75897 302 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 ZGLP1P0C6A0 271 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 MLLT11Q13015 90 aaPredicted RBP23.08■■□□□ 1.29
SHF-208ENST00000560734 GUSBP11Q6P575 273 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 BCDIN3DQ7Z5W3 292 aaKnown RBP23.08■■□□□ 1.29
SHF-208ENST00000560734 C17orf47Q8NEP4 570 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 PFN4Q8NHR9 129 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 PIGKQ92643 395 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 JAM3Q9BX67 310 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 SLC19A3Q9BZV2 496 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 MEPEQ9NQ76 525 aaPredicted RBP23.08■■□□□ 1.29
SHF-208ENST00000560734 C20orf141Q9NUB4 165 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 TAS2R16Q9NYV7 291 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 SIGLEC7Q9Y286 467 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 CORINQ9Y5Q5 1042 aa23.08■■□□□ 1.29
SHF-208ENST00000560734 BHLHE40O14503 412 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 ADAM11O75078 769 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 PDGFBP01127 241 aaPredicted RBP23.08■■□□□ 1.28
SHF-208ENST00000560734 MYL12AP19105 171 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 HTR1FP30939 366 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 NSDHLQ15738 373 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 ARMC4Q5T2S8 1044 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 SMARCD3Q6STE5 483 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 DCDC5Q6ZRR9 648 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 IGFN1Q86VF2 1251 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 ATCAYQ86WG3 371 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 GID4Q8IVV7 300 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 C1orf210Q8IVY1 113 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 MAML2Q8IZL2 1156 aaPredicted RBP23.08■■□□□ 1.28
SHF-208ENST00000560734 MINDY2Q8NBR6 621 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 RPL3LQ92901 407 aaKnown RBP23.08■■□□□ 1.28
SHF-208ENST00000560734 RNFT2Q96EX2 444 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 OPALINQ96PE5 141 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 CHCHD3Q9NX63 227 aaKnown RBP23.08■■□□□ 1.28
SHF-208ENST00000560734 ICAM5Q9UMF0 924 aa23.08■■□□□ 1.28
SHF-208ENST00000560734 MYL12BO14950 172 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 CSO75390 466 aaKnown RBP23.07■■□□□ 1.28
SHF-208ENST00000560734 FXYD6P3P58550 94 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 COPZ1P61923 177 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 CSTF1Q05048 431 aaKnown RBP23.07■■□□□ 1.28
SHF-208ENST00000560734 RGS21Q2M5E4 152 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 TMCO5AQ8N6Q1 288 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 OR1N1Q8NGS0 311 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 OR8D2Q9GZM6 311 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 VN1R1Q9GZP7 353 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 SLIRPQ9GZT3 109 aaKnown RBP23.07■■□□□ 1.28
SHF-208ENST00000560734 DCSTAMPQ9H295 470 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 MMP27Q9H306 513 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 LRRN3Q9H3W5 708 aa23.07■■□□□ 1.28
SHF-208ENST00000560734 EXOGQ9Y2C4 368 aaKnown RBP23.07■■□□□ 1.28
SHF-208ENST00000560734 ARID1BQ8NFD5 2236 aaPredicted RBP23.07■■□□□ 1.28
SHF-208ENST00000560734 CPED1A4D0V7 1026 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 PPM1BO75688 479 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 NGFRP08138 427 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 HSMCR30P0CW71 290 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 CDH11P55287 796 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 VWA2Q5GFL6 755 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 PERM1Q5SV97 790 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 PRAMEF17Q5VTA0 474 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 BPHLQ86WA6 291 aaPredicted RBP23.06■■□□□ 1.28
SHF-208ENST00000560734 GRHL3Q8TE85 626 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 LRFN5Q96NI6 719 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 NXF5Q9H1B4 397 aaKnown RBP23.06■■□□□ 1.28
SHF-208ENST00000560734 SIAEQ9HAT2 523 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 COPS7AQ9UBW8 275 aa23.06■■□□□ 1.28
SHF-208ENST00000560734 A0A087WUJ7 227 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 C2orf92A0A1B0GVN3 265 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 A0A1W2PQM1 296 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 FAM86C2PA6NEL3 165 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 ARHGAP33O14559 1287 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 HBQ1P09105 142 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 SLC9A3P48764 834 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 LSM3P62310 102 aaKnown RBP23.05■■□□□ 1.28
SHF-208ENST00000560734 CCL7P80098 99 aa23.05■■□□□ 1.28
SHF-208ENST00000560734 TSTQ16762 297 aaKnown RBP23.05■■□□□ 1.28
SHF-208ENST00000560734 KIRREL2Q6UWL6 708 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms