RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MAPK14Q16539 360 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 GTDC1Q4AE62 458 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 AGKQ53H12 422 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 FBXW10Q5XX13 1052 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ESPNLQ6ZVH7 1005 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZZZ3Q8IYH5 903 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ARFGAP2Q8N6H7 521 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 METTL25Q8N6Q8 603 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 OR2V1Q8NHB1 315 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 POC1BQ8TC44 478 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 OSTF1Q92882 214 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZG16BQ96DA0 208 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 SPDL1Q96EA4 605 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 C14orf79Q96F83 325 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 MRGPRX4Q96LA9 322 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 KLHL15Q96M94 604 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 LAT2Q9GZY6 243 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 PIGMQ9H3S5 423 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 CACYBPQ9HB71 228 aaKnown RBP11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 TIGARQ9NQ88 270 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 KCNN3Q9UGI6 736 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 PACSIN3Q9UKS6 424 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 TRIM33Q9UPN9 1127 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF175Q9Y473 711 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 NOTCH2Q04721 2471 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 MED12LQ86YW9 2145 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 A0A0J9YW62 118 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 TUBAL3A6NHL2 446 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 CLDN24A6NM45 220 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 EDF1O60869 148 aaKnown RBP11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 AQP8O94778 261 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 BCHEP06276 602 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 CRHP06850 196 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 CHRM4P08173 479 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 PSMA4P25789 261 aaKnown RBP11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 ADH6P28332 368 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 CTBP2P56545 445 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 MERTKQ12866 999 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 SQLEQ14534 574 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 TMEM176BQ3YBM2 270 aaPredicted RBP11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 VWA1Q6PCB0 445 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 LRRC74BQ6ZQY2 392 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 ACBD4Q8NC06 268 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 TMEM234Q8WY98 164 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 GTF2H4Q92759 462 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 TREX2Q9BQ50 279 aaPredicted RBP11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 SAP130Q9H0E3 1048 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 SLC38A1Q9H2H9 487 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 RAD21L1Q9H4I0 556 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 RABEP2Q9H5N1 569 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 MTHFD2LQ9H903 347 aaPredicted RBP11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 RNF122Q9H9V4 155 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 MCCC2Q9HCC0 563 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 SERINC1Q9NRX5 453 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 CALML5Q9NZT1 146 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 CLEC4AQ9UMR7 237 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 EMC9Q9Y3B6 208 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 PCDHB14Q9Y5E9 798 aa11.65□□□□□ -0.54
CTDSPL2-209ENST00000560620 ITPR2Q14571 2701 aa11.65□□□□□ -0.55
CTDSPL2-209ENST00000560620 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 PRAMEF27A3QJZ7 478 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 CLIC1O00299 241 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 ADAMDEC1O15204 470 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 TNFSF13O75888 250 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 GUSBP08236 651 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 VIMP08670 466 aaKnown RBP11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 TROVE2P10155 538 aaKnown RBP eCLIP11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 MAGEA8P43361 318 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 CRISP3P54108 245 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 SESN3P58005 492 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 IRX1P78414 480 aaPredicted RBP11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 SF3A3Q12874 501 aaKnown RBP eCLIP11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 SELENBP1Q13228 472 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 CTU2Q2VPK5 515 aaKnown RBP11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 FBXL19-AS1Q494R0 122 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 GTF2IRD2BQ6EKJ0 949 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 C3orf33Q6P1S2 294 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 BLOC1S3Q6QNY0 202 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 GTF2IRD2Q86UP8 949 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 PEX5LQ8IYB4 626 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 WDR60Q8WVS4 1066 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 OIT3Q8WWZ8 545 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 LURAP1Q96LR2 239 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 PAIP1Q9H074 479 aaKnown RBP11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 THUMPD1Q9NXG2 353 aaKnown RBP11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 GALNT8Q9NY28 637 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 CRIM1Q9NZV1 1036 aa11.64□□□□□ -0.55
CTDSPL2-209ENST00000560620 A0A096LPI6 279 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 AGAP5A6NIR3 686 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 C5orf58C9J3I9 102 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 DBIP07108 87 aaKnown RBP11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 TFPIP10646 304 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 UQCRBP14927 111 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 SHC1P29353 583 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 PGM1P36871 562 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLC6A8P48029 635 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 IDH2P48735 452 aaKnown RBP11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 MRPL19P49406 292 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms