RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 RTL4Q6ZR62 310 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 LHFPL3Q86UP9 236 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 MEX3DQ86XN8 651 aaKnown RBP7.47□□□□□ -1.21
SMAD3-212ENST00000559937 MARCH9Q86YJ5 346 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ARL14Q8N4G2 192 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ATP6V1C2Q8NEY4 427 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 TSTD1Q8NFU3 115 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 OR7G1Q8NGA0 311 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 OR4F15Q8NGB8 312 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 PFN4Q8NHR9 129 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 DNAJA4Q8WW22 397 aaPredicted RBP7.47□□□□□ -1.21
SMAD3-212ENST00000559937 GATAD2BQ8WXI9 593 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ACOT12Q8WYK0 555 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 RIT1Q92963 219 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 RBM18Q96H35 190 aaKnown RBP7.47□□□□□ -1.21
SMAD3-212ENST00000559937 FAM210AQ96ND0 272 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 DGAT2Q96PD7 388 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 SECISBP2Q96T21 854 aaKnown RBP7.47□□□□□ -1.21
SMAD3-212ENST00000559937 KATNB1Q9BVA0 655 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 TOR4AQ9NXH8 423 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 FLRT3Q9NZU0 649 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 RPS6KB2Q9UBS0 482 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 PRODH2Q9UF12 536 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 KLHL21Q9UJP4 597 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 SERTAD3Q9UJW9 196 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ADAM30Q9UKF2 790 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ICAM5Q9UMF0 924 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 NDRG2Q9UN36 371 aaKnown RBP7.47□□□□□ -1.21
SMAD3-212ENST00000559937 MMACHCQ9Y4U1 282 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 CSNK1G3Q9Y6M4 447 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 PIEZO1Q92508 2521 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ADAMTS20P59510 1910 aa7.46□□□□□ -1.21
SMAD3-212ENST00000559937 TRIOO75962 3097 aa7.46□□□□□ -1.21
SMAD3-212ENST00000559937 A0A0A6YYC8 382 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 NPIPA5A0A0B4J1W7 369 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 FITM1A5D6W6 292 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SYNDIG1LA6NDD5 238 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 CCDC182A6NF36 153 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 C12orf71A8MTZ7 269 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 METTL12A8MUP2 240 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 NPIPA7E9PJI5 369 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 TGFBR3LH3BV60 316 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 I3L1I5 382 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 GABRPO00591 440 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SNPHO15079 494 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 HCRTR1O43613 425 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 RGS9O75916 674 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 NDUFB2O95178 105 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 APOL3O95236 402 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SLC2A10O95528 541 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 LALBAP00709 142 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 NPIPA8P0DM63 369 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SAGP10523 405 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 PEPDP12955 493 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 ZNF3P17036 446 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SLC2A5P22732 501 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 CD38P28907 300 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 MLLT3P42568 568 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 MTNR1BP49286 362 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 MAZP56270 477 aaKnown RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SCN1BQ07699 218 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 CBX3Q13185 183 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 ASAH1Q13510 395 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 C1orf61Q13536 156 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 ZNF79Q15937 498 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 ISXQ2M1V0 245 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 DEFB110Q30KQ9 67 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 GLYR1Q49A26 553 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 ZNF542PQ5EBM4 170 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 PLBD1Q6P4A8 553 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 OGFOD3Q6PK18 319 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 CCBE1Q6UXH8 406 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 DGAT2L6Q6ZPD8 337 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 PRR23CQ6ZRP0 262 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 Q6ZS52 159 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 GDPD3Q7L5L3 318 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SHFQ7M4L6 423 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 ZAR1Q86SH2 424 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SLITRK4Q8IW52 837 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SFTPA2Q8IWL1 248 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 LAX1Q8IWV1 398 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 OR8H2Q8N162 312 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 ZNF687Q8N1G0 1237 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SIRT6Q8N6T7 355 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SLC37A3Q8NCC5 494 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 BBS1Q8NFJ9 593 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 CADM4Q8NFZ8 388 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 OR51G2Q8NGK0 314 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 OR13C2Q8NGS9 318 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 OR4C6Q8NH72 309 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SPRYD4Q8WW59 207 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 KISS1RQ969F8 398 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 MRPL48Q96GC5 212 aaKnown RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 MAP3K3Q99759 626 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 IFT27Q9BW83 186 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 PHF7Q9BWX1 381 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-212ENST00000559937 SLC19A3Q9BZV2 496 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 HOXD1Q9GZZ0 328 aa7.46□□□□□ -1.22
SMAD3-212ENST00000559937 KCNN2Q9H2S1 579 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms