RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 BHLHA15Q7RTS1 189 aaPredicted RBP11.61□□□□□ -0.55
TPM1-220ENST00000559556 DTX2Q86UW9 622 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 C10orf107Q8IVU9 208 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ZNF619Q8N2I2 560 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 CCDC63Q8NA47 563 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 SFXN5Q8TD22 340 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 GTPBP3Q969Y2 492 aaKnown RBP11.61□□□□□ -0.55
TPM1-220ENST00000559556 PSD2Q9BQI7 771 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 GATA5Q9BWX5 397 aaPredicted RBP11.61□□□□□ -0.55
TPM1-220ENST00000559556 ACTRT3Q9BYD9 372 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 GRIP2Q9C0E4 1043 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 PPCSQ9HAB8 311 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 GPATCH2Q9NW75 528 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 KLHL9Q9P2J3 617 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 MID2Q9UJV3 735 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ING1Q9UK53 422 aaPredicted RBP11.61□□□□□ -0.55
TPM1-220ENST00000559556 LIPT1Q9Y234 373 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 CARD8Q9Y2G2 431 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 GOLGA8QA0A0J9YX86 632 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 GOLGA8OA6NCC3 632 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 DPRXA6NFQ7 191 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 TMEM114B3SHH9 223 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 TMEM233B4DJY2 109 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 GOLGA8NF8WBI6 632 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 TLX2O43763 284 aaPredicted RBP11.6□□□□□ -0.55
TPM1-220ENST00000559556 CD5LO43866 347 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 KRT16P08779 473 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 COX5AP20674 150 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 SLC7A1P30825 629 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 CCT3P49368 545 aaKnown RBP11.6□□□□□ -0.55
TPM1-220ENST00000559556 ATP12AP54707 1039 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 RAC3P60763 192 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 TP53BP2Q13625 1128 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 UGT3A2Q3SY77 523 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 C3orf33Q6P1S2 294 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 DDIASQ8IXT1 998 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 OR7A2PQ8NGA2 310 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 OR56A1Q8NGH5 318 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 TWIST2Q8WVJ9 160 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 ZNF524Q96C55 264 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 CHMP6Q96FZ7 201 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 TRAF4Q9BUZ4 470 aaPredicted RBP11.6□□□□□ -0.55
TPM1-220ENST00000559556 REPIN1Q9BWE0 567 aaKnown RBP11.6□□□□□ -0.55
TPM1-220ENST00000559556 CXorf36Q9H7Y0 433 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 ANKZF1Q9H8Y5 726 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 DTNAQ9Y4J8 743 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 WNK2Q9Y3S1 2297 aa11.6□□□□□ -0.55
TPM1-220ENST00000559556 IGHV3-15A0A0B4J1V0 119 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 A0A1W2PNR3 127 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 SHISA9B4DS77 424 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 PIP5K1BO14986 540 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 SMAD9O15198 467 aaKnown RBP11.59□□□□□ -0.55
TPM1-220ENST00000559556 ZNF500O60304 480 aaPredicted RBP11.59□□□□□ -0.55
TPM1-220ENST00000559556 EIF4E2O60573 245 aaKnown RBP11.59□□□□□ -0.55
TPM1-220ENST00000559556 CYTIPO60759 359 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 TRIM13O60858 407 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 LYZL6O75951 148 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 CD8AP01732 235 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 SHBGP04278 402 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 TP53P04637 393 aaPredicted RBP11.59□□□□□ -0.55
TPM1-220ENST00000559556 FESP07332 822 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 CHRNGP07510 517 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 FGF4P08620 206 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 LAMP1P11279 417 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 KRT4P19013 534 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 ENPP1P22413 925 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 MAPK1P28482 360 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 RNF144AP50876 292 aaPredicted RBP11.59□□□□□ -0.55
TPM1-220ENST00000559556 FAPQ12884 760 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 PTGR1Q14914 329 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 PPA1Q15181 289 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 NDUFAF6Q330K2 333 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 XKR7Q5GH72 579 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 SSX8Q7RTT4 187 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 HIPK1Q86Z02 1210 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 GSPT2Q8IYD1 628 aaKnown RBP11.59□□□□□ -0.55
TPM1-220ENST00000559556 TOR1AIP2Q8NFQ8 470 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 ADAMTS15Q8TE58 950 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 OR5P2Q8WZ92 322 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 BARX1Q9HBU1 254 aaPredicted RBP11.59□□□□□ -0.55
TPM1-220ENST00000559556 ATAD3AQ9NVI7 634 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 FAIMQ9NVQ4 179 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 MKS1Q9NXB0 559 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 PRSS50Q9UI38 385 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 FAF1Q9UNN5 650 aaPredicted RBP11.59□□□□□ -0.55
TPM1-220ENST00000559556 KCNE3Q9Y6H6 103 aa11.59□□□□□ -0.55
TPM1-220ENST00000559556 ZNF724A8MTY0 619 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 GTPBP1O00178 669 aaKnown RBP11.58□□□□□ -0.56
TPM1-220ENST00000559556 ZNF264O43296 627 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 NPHS1O60500 1241 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 DNAJA2O60884 412 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 RAMP1O60894 148 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 NDUFS7O75251 213 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 H6PDO95479 791 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 UBL4AP11441 157 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 EDNRAP25101 427 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 CDH11P55287 796 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 RASGEF1BQ0VAM2 473 aa11.58□□□□□ -0.56
TPM1-220ENST00000559556 SKP2Q13309 424 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms