RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 NUDCD3Q8IVD9 361 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 ZNF781Q8N8C0 355 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 SFXN5Q8TD22 340 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 ZFP90Q8TF47 636 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 CPNE4Q96A23 557 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 THUMPD3Q9BV44 507 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 BHLHE41Q9C0J9 482 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 C20orf27Q9GZN8 174 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 HOXD1Q9GZZ0 328 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 HHATLQ9HCP6 504 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 ZNF264O43296 627 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 TYROBPO43914 113 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 GCM2O75603 506 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 ADAP00813 363 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 C1QCP02747 245 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 HEXAP06865 529 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 PPP3CBP16298 524 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 EDNRAP25101 427 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 ETV4P43268 484 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 TFAP2EQ6VUC0 442 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 AENQ8WTP8 325 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 AKAP1Q92667 903 aaKnown RBP eCLIP18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 NEUROG1Q92886 237 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 COX4I2Q96KJ9 171 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 SLC35G5Q96KT7 338 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 TIGARQ9NQ88 270 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 KLHL13Q9P2N7 655 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 GPR52Q9Y2T5 361 aa18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 GPC6Q9Y625 555 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-206ENST00000559373 JMJD1CQ15652 2540 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 RTTNQ86VV8 2226 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 RNF103-CHMP3A0A140T963 221 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 ESPNB1AK53 854 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 PRKD3O94806 890 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 CPSF4O95639 269 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 KRT16P08779 473 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 UBL4AP11441 157 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 ELK4P28324 431 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 PCSK6P29122 969 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 CLDN8P56748 225 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 CAPRIN1Q14444 709 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 CHI3L2Q15782 390 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 GABRG1Q8N1C3 465 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 OR4A15Q8NGL6 344 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 OR5W2Q8NH69 310 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 TMEM171Q8WVE6 324 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 OR5B2Q96R09 309 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 ROPN1BQ9BZX4 212 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 OR51I1Q9H343 314 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 AKTIPQ9H8T0 292 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 ROPN1Q9HAT0 212 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 PRSS50Q9UI38 385 aa18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 CHD3Q12873 2000 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-206ENST00000559373 SERINC4A6NH21 518 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 HS3ST1O14792 307 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 CLOCKO15516 846 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 BCAS1O75363 584 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 H6PDO95479 791 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 CNOT4O95628 575 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 UBTFL6P0CB48 400 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 PSMB1P20618 241 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 ADH6P28332 368 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 SLC7A1P30825 629 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 SERPINB5P36952 375 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 SUMO3P55854 103 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 EMX2Q04743 252 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 RNPS1Q15287 305 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 MAPK14Q16539 360 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 TIGD2Q4W5G0 525 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 LILRB1Q8NHL6 650 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 IGFBPL1Q8WX77 278 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 RAB8BQ92930 207 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 MRGPRX4Q96LA9 322 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 ZNF300Q96RE9 604 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 BDH2Q9BUT1 245 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 FANCFQ9NPI8 374 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 NOP53Q9NZM5 478 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 ING1Q9UK53 422 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 LAMP3Q9UQV4 416 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 ACTL7BQ9Y614 415 aa18.21■□□□□ 0.51
TSPAN3-206ENST00000559373 PLCE1Q9P212 2302 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 GJE1A6NN92 205 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 ZNF814B7Z6K7 855 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 UGT2B17O75795 530 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 YES1P07947 543 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 PABPC4LP0CB38 370 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 OR12D1P0DN82 309 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 IL32P24001 234 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 PHC1P78364 1004 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 SELENBP1Q13228 472 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 CBFBQ13951 182 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 TAB1Q15750 504 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 SFRP5Q5T4F7 317 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 TNFAIP8L2Q6P589 184 aaPredicted RBP18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 PRSS57Q6UWY2 283 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 C16orf62Q7Z3J2 963 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 TOR1AIP2Q8NFQ8 470 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 STEAP2Q8NFT2 490 aa18.2■□□□□ 0.5
TSPAN3-206ENST00000559373 XAGE5Q8WWM1 108 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms