RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CA13Q8N1Q1 262 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 GHDCQ8N2G8 530 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 LIX1Q8N485 282 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SLC5A8Q8N695 610 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 ASCC1Q8N9N2 400 aaKnown RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 ZFP62Q8NB50 900 aaPredicted RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 TMEM178AQ8NBL3 297 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 OR52B6Q8NGF0 335 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 OR6F1Q8NGZ6 308 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 C16orf52Q8NHV5 167 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 ANGPTL6Q8NI99 470 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 FAM57AQ8TBR7 257 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SGCDQ92629 289 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CMTM7Q96FZ5 175 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 PTCHD1Q96NR3 888 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 VKORC1Q9BQB6 163 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CDCA4Q9BXL8 241 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CD244Q9BZW8 370 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 NDEL1Q9GZM8 345 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 NUAK2Q9H093 628 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 IPPKQ9H8X2 491 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SERHLQ9NQF3 203 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 ABCB10Q9NRK6 738 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 ADPRHL2Q9NX46 363 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 STUB1Q9UNE7 303 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SNX6Q9UNH7 406 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 PPIEQ9UNP9 301 aaKnown RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 USP22Q9UPT9 525 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 POFUT2Q9Y2G5 429 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SAMHD1Q9Y3Z3 626 aaKnown RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 MAGED1Q9Y5V3 778 aaPredicted RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 PHF3Q92576 2039 aaKnown RBP5.4□□□□□ -1.55
USP3-212ENST00000559276 CCDC168Q8NDH2 2452 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 NCKAP5O14513 1909 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 A0A0G2JMM0 328 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 A0A1W2PPB8 328 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 A0A1W2PRS3 328 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 ANKRD34BA5PLL1 514 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 A8MUA0 341 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 KIR3DP1A8MWS1 328 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CDK2AP1O14519 115 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 RFXANKO14593 260 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 SEC14L5O43304 696 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 TBX1O43435 398 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 ZNF354AO60765 605 aaPredicted RBP5.39□□□□□ -1.55
USP3-212ENST00000559276 TOXO94900 526 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 SLITRK5O94991 958 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 KCNK2O95069 426 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 ALX3O95076 343 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CLDN9O95484 217 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 LGI1O95970 557 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 BCKDHAP12694 445 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 HSD3B1P14060 373 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 ABOP16442 354 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 EPB42P16452 691 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 PTPN6P29350 595 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 FMO3P31513 532 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 KDELR2P33947 212 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 PCGF2P35227 344 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 AHRP35869 848 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 ARL1P40616 181 aaPredicted RBP5.39□□□□□ -1.55
USP3-212ENST00000559276 HNF4AP41235 474 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 MAP2K4P45985 399 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 HTR3AP46098 478 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CYB561P49447 251 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 RGS6P49758 472 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 HNMTP50135 292 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 MEOX1P50221 254 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 HTR6P50406 440 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 DAPP51397 102 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CASP6P55212 293 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 AP1S2P56377 157 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 OR2B6P58173 313 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 GNG2P59768 71 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 GPR85P60893 370 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 RPP38P78345 283 aaKnown RBP5.39□□□□□ -1.55
USP3-212ENST00000559276 IFITM2Q01629 132 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 TLE4Q04727 773 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CD300CQ08708 224 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 RBBP4Q09028 425 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 SLC13A2Q13183 592 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 DGCR6Q14129 220 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CDK10Q15131 360 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 SF3B4Q15427 424 aaKnown RBP eCLIP5.39□□□□□ -1.552e-7■■■■■ 32.9
USP3-212ENST00000559276 MAPK11Q15759 364 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 C18orf21Q32NC0 220 aaPredicted RBP5.39□□□□□ -1.55
USP3-212ENST00000559276 XKR6Q5GH73 641 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 ARMCX4Q5H9R4 360 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 TMEM236Q5W0B7 351 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 DESI1Q6ICB0 168 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 ADNP2Q6IQ32 1131 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 NXPE4Q6UWF7 544 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CCBE1Q6UXH8 406 aaPredicted RBP5.39□□□□□ -1.55
USP3-212ENST00000559276 AHSA2Q719I0 299 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 VN1R5Q7Z5H4 357 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CAMKMTQ7Z624 323 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 TMEM179BQ7Z7N9 219 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CDH24Q86UP0 819 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 CD163Q86VB7 1156 aa5.39□□□□□ -1.55
USP3-212ENST00000559276 RNF130Q86XS8 419 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms