RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 BST1Q10588 318 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 VGLL4Q14135 290 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 SERTAD2Q14140 314 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 KCNJ11Q14654 390 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 PDK3Q15120 406 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 ZMYND11Q15326 602 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 TGIF1Q15583 401 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 NDUFA9Q16795 377 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 EXOC3L2Q2M3D2 409 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 QRICH1Q2TAL8 776 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 TIMM50Q3ZCQ8 353 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 LRRC23Q53EV4 343 aaPredicted RBP1.25□□□□□ -2.21
USP3-209ENST00000558925 FAM182AQ5T1J6 154 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 CCDC183Q5T5S1 534 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 MEDAGQ5VYS4 303 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 SEL1L3Q68CR1 1132 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 TMEM225Q6GV28 225 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 OR4F3Q6IEY1 312 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 FAHD2BQ6P2I3 314 aaPredicted RBP1.25□□□□□ -2.21
USP3-209ENST00000558925 ZYG11AQ6WRX3 759 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 ZNF600Q6ZNG1 722 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 Q6ZPB1 254 aaPredicted RBP1.25□□□□□ -2.21
USP3-209ENST00000558925 EFL1Q7Z2Z2 1120 aaKnown RBP1.25□□□□□ -2.21
USP3-209ENST00000558925 MOB3BQ86TA1 216 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 ERICH1Q86X53 443 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 SLC22A9Q8IVM8 553 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 C9orf40Q8IXQ3 194 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 LRRC75A-AS1Q8N1F1 130 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 OR2L13Q8N349 312 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 MFSD9Q8NBP5 474 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 SDR9C7Q8NEX9 313 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 BEST4Q8NFU0 473 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 OR1L4Q8NGR5 311 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 AKR7LQ8NHP1 331 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 CCDC26Q8TAB7 109 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 PAQR8Q8TEZ7 354 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 SCFD1Q8WVM8 642 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 RASL10AQ92737 203 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 TOMM40LQ969M1 308 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 FBXO32Q969P5 355 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 NT5C3BQ969T7 300 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 FAF2Q96CS3 445 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 FAHD2AQ96GK7 314 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 TIMD4Q96H15 378 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 COQ2Q96H96 371 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 VSIG2Q96IQ7 327 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 MS4A14Q96JA4 679 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 TBX15Q96SF7 602 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 CHIAQ9BZP6 476 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 ROPN1BQ9BZX4 212 aaPredicted RBP1.25□□□□□ -2.21
USP3-209ENST00000558925 ELOVL4Q9GZR5 314 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 GLT8D2Q9H1C3 349 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 PNNQ9H307 717 aaKnown RBP1.25□□□□□ -2.21
USP3-209ENST00000558925 PANK3Q9H999 370 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 LRRC40Q9H9A6 602 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 CAB39LQ9H9S4 337 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 POPDC2Q9HBU9 364 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 CUTCQ9NTM9 273 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 IMPAD1Q9NX62 359 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 CLEC5AQ9NY25 188 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 ZNF581Q9P0T4 197 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 WRAP73Q9P2S5 460 aaPredicted RBP1.25□□□□□ -2.21
USP3-209ENST00000558925 SPRR3Q9UBC9 169 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 ADAM28Q9UKQ2 775 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 RPH3ALQ9UNE2 315 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 SCML2Q9UQR0 700 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 RASD1Q9Y272 281 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 PPIAL4AQ9Y536 164 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 SLCO1B1Q9Y6L6 691 aa1.25□□□□□ -2.21
USP3-209ENST00000558925 IGHV3-35A0A0C4DH35 117 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 IGHV2-70DA0A0C4DH43 119 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 A0A1B0GUS0 222 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 XKRY2A2RUG3 117 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 HELTA6NFD8 242 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 SNTNA6NMZ2 147 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 FAM220BPB1ANY3 271 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 K7ENP7 123 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 AP3B1O00203 1094 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 RS1O15537 224 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 ZNF264O43296 627 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 PRKYO43930 277 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 TIMM8AO60220 97 aaPredicted RBP1.24□□□□□ -2.21
USP3-209ENST00000558925 FCMRO60667 390 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 TPST2O60704 377 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 RAMP3O60896 148 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 HMMRO75330 724 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 PALMO75781 387 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 ATP5LO75964 103 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 DUSP14O95147 198 aaKnown RBP1.24□□□□□ -2.21
USP3-209ENST00000558925 GAPDHP04406 335 aaKnown RBP1.24□□□□□ -2.21
USP3-209ENST00000558925 H2BFMP0C1H6 154 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 CCDC166P0CW27 439 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 POU2F1P14859 743 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 PGAM2P15259 253 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 SERPINA2P20848 420 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 VDAC1P21796 283 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 FASP25445 335 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 GCAP28676 217 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 ADORA2BP29275 332 aa1.24□□□□□ -2.21
USP3-209ENST00000558925 NF2P35240 595 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms