RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 DHRS4L1P0CG22 281 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 UBL4AP11441 157 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 PSMB1P20618 241 aaKnown RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 PRPS1L1P21108 318 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ATP6V1C1P21283 382 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ADSLP30566 484 aaPredicted RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 SERPINB5P36952 375 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 RPL3P39023 403 aaKnown RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 PTH2RP49190 550 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 EMX2Q04743 252 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 GPR68Q15743 365 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ALKBH2Q6NS38 261 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 CLEC9AQ6UXN8 241 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 C6orf120Q7Z4R8 191 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 MTERF4Q7Z6M4 381 aaKnown RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 NUDCD3Q8IVD9 361 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 LRRC75A-AS1Q8N1F1 130 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 TMCO5AQ8N6Q1 288 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ZFP90Q8TF47 636 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ZNF75CPQ92670 426 aaPredicted RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 RAB8BQ92930 207 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ZNF775Q96BV0 537 aaPredicted RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 ZG16BQ96DA0 208 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 SLC35G5Q96KT7 338 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 TEX37Q96LM6 180 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 PSD2Q9BQI7 771 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ROPN1BQ9BZX4 212 aaPredicted RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 OR51I1Q9H343 314 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ROPN1Q9HAT0 212 aaPredicted RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 KLHL13Q9P2N7 655 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 MKLN1Q9UL63 735 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 FAF1Q9UNN5 650 aaPredicted RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 CADP27708 2225 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 SERINC4A6NH21 518 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 ZNF264O43296 627 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 DNAJA2O60884 412 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 HSPA4LO95757 839 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 SERPINE1P05121 402 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 ALDOCP09972 364 aaKnown RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 BGNP21810 368 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 MATN1P21941 496 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 ME2P23368 584 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 CCR4P51679 360 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 NR1H2P55055 460 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 SUMO3P55854 103 aaPredicted RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 ABCE1P61221 599 aaKnown RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 ZNF141Q15928 474 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 LSM12Q3MHD2 195 aaKnown RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 BEX5Q5H9J7 111 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 HEPHL1Q6MZM0 1159 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 WDR93Q6P2C0 686 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 TNFAIP8L2Q6P589 184 aaPredicted RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 FCRLAQ7L513 359 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 P3H2Q8IVL5 708 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 OR5W2Q8NH69 310 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 THUMPD3Q9BV44 507 aaKnown RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 ZNF350Q9GZX5 532 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 ATAD3AQ9NVI7 634 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 PNPOQ9NVS9 261 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 PAQR5Q9NXK6 330 aaPredicted RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 NOP53Q9NZM5 478 aaKnown RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 GPC6Q9Y625 555 aaPredicted RBP12.03□□□□□ -0.48
VPS18-203ENST00000558855 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
VPS18-203ENST00000558855 CUBNO60494 3623 aa12.02□□□□□ -0.48
VPS18-203ENST00000558855 GTPBP1O00178 669 aaKnown RBP12.02□□□□□ -0.49
VPS18-203ENST00000558855 RAMP1O60894 148 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 CYP7B1O75881 506 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 HEXAP06865 529 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 UBTFL6P0CB48 400 aaPredicted RBP12.02□□□□□ -0.49
VPS18-203ENST00000558855 OR12D1P0DN82 309 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 ADH6P28332 368 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 IL12AP29459 219 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 NTF4P34130 210 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 EIF1P41567 113 aaKnown RBP12.02□□□□□ -0.49
VPS18-203ENST00000558855 KRTAP1-1Q07627 177 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 SELENBP1Q13228 472 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 TAB1Q15750 504 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 ARHGAP11BQ3KRB8 267 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 KRT71Q3SY84 523 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 TNFAIP8L3Q5GJ75 292 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 SPANXN4Q5MJ08 99 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 TYW3Q6IPR3 259 aaKnown RBP12.02□□□□□ -0.49
VPS18-203ENST00000558855 EMBQ6PCB8 327 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 FRRS1Q6ZNA5 592 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 C20orf204Q6ZNR8 217 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 BEND4Q6ZU67 534 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 PRIMA1Q86XR5 153 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 MREGQ8N565 214 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 ZNF527Q8NB42 609 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 FAM71CQ8NEG0 241 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 OR4A15Q8NGL6 344 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 PIGTQ969N2 578 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 CPNE4Q96A23 557 aaPredicted RBP12.02□□□□□ -0.49
VPS18-203ENST00000558855 MRGPRX4Q96LA9 322 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 NUF2Q9BZD4 464 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 NMUR2Q9GZQ4 415 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 GLRX2Q9NS18 164 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 TLN2Q9Y4G6 2542 aa12.02□□□□□ -0.49
VPS18-203ENST00000558855 RNASET2O00584 256 aaKnown RBP12.01□□□□□ -0.49
VPS18-203ENST00000558855 HS3ST1O14792 307 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms