RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CSTAP01040 98 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 CD99P14209 185 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 SLC7A1P30825 629 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 KHKP50053 298 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 MAGOHP61326 146 aaKnown RBP10.65□□□□□ -0.7
HERC1-202ENST00000558324 SELENBP1Q13228 472 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 SKP2Q13309 424 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 CASP8Q14790 479 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 DPY19L1Q2PZI1 675 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 DEFB113Q30KQ7 82 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 ATAD3BQ5T9A4 648 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 NXNQ6DKJ4 435 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 OGFOD2Q6N063 350 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 C22orf34Q6ZV56 151 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 TGIF2LYQ8IUE0 185 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 ZFP90Q8TF47 636 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 ROPN1LQ96C74 230 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 MARK4Q96L34 752 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 MRGPRX4Q96LA9 322 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 ALPK1Q96QP1 1244 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 INPP5KQ9BT40 448 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 THUMPD3Q9BV44 507 aaKnown RBP10.65□□□□□ -0.7
HERC1-202ENST00000558324 ZNF350Q9GZX5 532 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 COQ10BQ9H8M1 238 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 UBTD1Q9HAC8 227 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 TIGARQ9NQ88 270 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 NKIRAS1Q9NYS0 192 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 WDR45Q9Y484 360 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 HRNRQ86YZ3 2850 aaPredicted RBP10.65□□□□□ -0.7
HERC1-202ENST00000558324 TRPC5OSA6NMA1 111 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 HDAC3O15379 428 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 KIAA0513O60268 411 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 EIF4E2O60573 245 aaKnown RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 BCAS1O75363 584 aaPredicted RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 ERLIN1O75477 346 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 NTN1O95631 604 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 GSNP06396 782 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 KLK2P20151 261 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 CRYGSP22914 178 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 ADH6P28332 368 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 IL12AP29459 219 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 CDKN2CP42773 168 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 PCYT1AP49585 367 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 HPCAP84074 193 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 FUT5Q11128 374 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 FOXD4Q12950 439 aaPredicted RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 ZNF141Q15928 474 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 MAPK14Q16539 360 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 TIGD2Q4W5G0 525 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 GPAT3Q53EU6 434 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 TMEM201Q5SNT2 666 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 SAXO2Q658L1 398 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 GTF2IRD2BQ6EKJ0 949 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 TYW3Q6IPR3 259 aaKnown RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 HEPHL1Q6MZM0 1159 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 DNAJC14Q6Y2X3 702 aaPredicted RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 EIF3MQ7L2H7 374 aaKnown RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 SPATA19Q7Z5L4 167 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 GTF2IRD2Q86UP8 949 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 STK32CQ86UX6 486 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 LSRQ86X29 649 aaPredicted RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 RNF130Q86XS8 419 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 LRRC34Q8IZ02 419 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 PNPT1Q8TCS8 783 aaKnown RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 MIPOL1Q8TD10 442 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 RNF128Q8TEB7 428 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 CPNE4Q96A23 557 aaPredicted RBP10.64□□□□□ -0.71
HERC1-202ENST00000558324 MBD6Q96DN6 1003 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 NEURL3Q96EH8 262 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 CCDC115Q96NT0 180 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 OR52E6Q96RD3 313 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 PANX1Q96RD7 426 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 ZBTB18Q99592 522 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 PLSCR4Q9NRQ2 329 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 GLRX2Q9NS18 164 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 THAP1Q9NVV9 213 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 HIVEP1P15822 2718 aa10.64□□□□□ -0.71
HERC1-202ENST00000558324 CCDC154A6NI56 674 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 SNNO75324 88 aaPredicted RBP10.63□□□□□ -0.71
HERC1-202ENST00000558324 H6PDO95479 791 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 AGR2O95994 175 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 PGRP06401 933 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 PABPC4LP0CB38 370 aaKnown RBP10.63□□□□□ -0.71
HERC1-202ENST00000558324 CD53P19397 219 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 ENPP1P22413 925 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 RYKP34925 604 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 RIPPLY3P57055 190 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 SESN3P58005 492 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 MERTKQ12866 999 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 RNPS1Q15287 305 aaKnown RBP10.63□□□□□ -0.71
HERC1-202ENST00000558324 ATG16L1Q676U5 607 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 C3orf33Q6P1S2 294 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 STAC2Q6ZMT1 411 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 FRRS1Q6ZNA5 592 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 ZNF621Q6ZSS3 439 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 FCRLAQ7L513 359 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 NUFIP2Q7Z417 695 aaKnown RBP10.63□□□□□ -0.71
HERC1-202ENST00000558324 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms