RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 NSMCE2Q96MF7 247 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 SLC6A5Q9Y345 797 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 MRPS18CQ9Y3D5 142 aaKnown RBP19.29■□□□□ 0.68
CASC4-204ENST00000557945 PCNX3Q9H6A9 2034 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 M0R3H8 397 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 LGI1O95970 557 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 IGHG3P01860 377 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 C8BP07358 591 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 GCKP35557 465 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 IDH2P48735 452 aaKnown RBP19.28■□□□□ 0.68
CASC4-204ENST00000557945 TDGF1P3P51864 188 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 SELENOWP63302 87 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 FOXK1P85037 733 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 HSF1Q00613 529 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 ELOAQ14241 798 aaKnown RBP19.28■□□□□ 0.68
CASC4-204ENST00000557945 TRIM25Q14258 630 aaKnown RBP19.28■□□□□ 0.68
CASC4-204ENST00000557945 PLPPR5Q32ZL2 321 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 VANGL1Q8TAA9 524 aaPredicted RBP19.28■□□□□ 0.68
CASC4-204ENST00000557945 RNF145Q96MT1 663 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 SFXN2Q96NB2 322 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 GORASP2Q9H8Y8 452 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 RPS6KA6Q9UK32 745 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 SH3GLB1Q9Y371 365 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 SVILO95425 2214 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 CHD6Q8TD26 2715 aa19.28■□□□□ 0.68
CASC4-204ENST00000557945 HCN1O60741 890 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 STAMBPO95630 424 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 GP1BBP13224 206 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 EDN3P14138 238 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 ACAA2P42765 397 aaKnown RBP19.27■□□□□ 0.68
CASC4-204ENST00000557945 COPZ1P61923 177 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 TLE1Q04724 770 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 FOXF1Q12946 379 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 GFRALQ6UXV0 394 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 CYP2R1Q6VVX0 501 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 CBLL1Q75N03 491 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 ULK2Q8IYT8 1036 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 NEIL3Q8TAT5 605 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 TMEM234Q8WY98 164 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 SLC35B4Q969S0 331 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 ZBTB8AQ96BR9 441 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 ARHGDIGQ99819 225 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 PIGQQ9BRB3 760 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 MUC13Q9H3R2 512 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 EVA1AQ9H8M9 152 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 ACTR3BQ9P1U1 418 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 SLC9A8Q9Y2E8 581 aa19.27■□□□□ 0.68
CASC4-204ENST00000557945 HEATR5AQ86XA9 2040 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 A0A1B0GTH9 108 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 SUSD5O60279 629 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 PRKCAP17252 672 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 TNFRSF1BP20333 461 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 SESN3P58005 492 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 GLYR1Q49A26 553 aaPredicted RBP19.26■□□□□ 0.67
CASC4-204ENST00000557945 PGM2L1Q6PCE3 622 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 FKBP9P1Q75LS8 142 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 VTCN1Q7Z7D3 282 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 CARM1Q86X55 608 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 DHFR2Q86XF0 187 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 CADM2Q8N3J6 435 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 ZNF524Q96C55 264 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 ASB9Q96DX5 294 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 NPAS1Q99742 590 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 WFDC6Q9BQY6 131 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 DCAF13Q9NV06 445 aaKnown RBP19.26■□□□□ 0.67
CASC4-204ENST00000557945 SAMD4AQ9UPU9 718 aaKnown RBP19.26■□□□□ 0.67
CASC4-204ENST00000557945 FREM3P0C091 2139 aa19.26■□□□□ 0.67
CASC4-204ENST00000557945 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 OR2M5A3KFT3 312 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 TMEM229AB2RXF0 380 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 ZNHIT1O43257 154 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 EIF1P41567 113 aaKnown RBP19.25■□□□□ 0.67
CASC4-204ENST00000557945 B3GALT5-AS1P59052 145 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 MS4A2Q01362 244 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 C19orf57Q0VDD7 668 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 NRF1Q16656 503 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 ARHGAP11AQ6P4F7 1023 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 AAGABQ6PD74 315 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 RANBP3LQ86VV4 465 aaPredicted RBP19.25■□□□□ 0.67
CASC4-204ENST00000557945 LACC1Q8IV20 430 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 EID3Q8N140 333 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 GTPBP8Q8N3Z3 284 aaPredicted RBP19.25■□□□□ 0.67
CASC4-204ENST00000557945 OR6T1Q8NGN1 323 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 ST8SIA1Q92185 356 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 HSH2DQ96JZ2 352 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 PRR14Q9BWN1 585 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 PLSCR2Q9NRY7 297 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 ACER3Q9NUN7 267 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 TNFRSF10DQ9UBN6 386 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 V9GYQ6 96 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 ZNF407Q9C0G0 2248 aa19.25■□□□□ 0.67
CASC4-204ENST00000557945 A0A1B0GVC2 190 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 FAAHO00519 579 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 ATP6V1B2P21281 511 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 OR1E2P47887 323 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 ZNF136P52737 540 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 MERTKQ12866 999 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 IFI44LQ53G44 452 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 POMZP3Q6PJE2 187 aa19.24■□□□□ 0.67
CASC4-204ENST00000557945 ASRGL1Q7L266 308 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms