RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PTNP21246 168 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 KRT20P35900 424 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 CLDN6P56747 220 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 NUP107P57740 925 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ESRRGP62508 458 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ALDH6A1Q02252 535 aaKnown RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 OCA2Q04671 838 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ST3GAL3Q11203 375 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 TOP3AQ13472 1001 aaPredicted RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 IL11RAQ14626 422 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 PTGES3Q15185 160 aaKnown RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 DECR1Q16698 335 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 C12orf73Q69YU5 71 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 APOOLQ6UXV4 268 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ZNF730Q6ZMV8 503 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 KCTD8Q6ZWB6 473 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 MBOAT2Q6ZWT7 520 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 GRAMD2AQ8IUY3 354 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 APLFQ8IW19 511 aaPredicted RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 PRR22Q8IZ63 422 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 SPARTQ8N0X7 666 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 IQCF1Q8N6M8 205 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 SUMF1Q8NBK3 374 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 POGLUT1Q8NBL1 392 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 BPIFB6Q8NFQ5 453 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 FAM81AQ8TBF8 368 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 GNPDA2Q8TDQ7 276 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 STK35Q8TDR2 534 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 TMEM255BQ8WV15 326 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ACOT11Q8WXI4 607 aaPredicted RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 SLC38A4Q969I6 547 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 FKBP10Q96AY3 582 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ZNF524Q96C55 264 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 LCORQ96JN0 433 aaPredicted RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 APOL4Q9BPW4 351 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 KLHDC3Q9BQ90 382 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 RHNO1Q9BSD3 238 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 G6PC3Q9BUM1 346 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 POLR2J2Q9GZM3 115 aaKnown RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 FAM192AQ9GZU8 254 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 WWTR1Q9GZV5 400 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 POLR2J3Q9H1A7 115 aaKnown RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 ADNPQ9H2P0 1102 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 DSN1Q9H410 356 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ANKRD19PQ9H560 264 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 DUSP21Q9H596 190 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 LIN28AQ9H9Z2 209 aaKnown RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 RASSF1Q9NS23 344 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 SLC7A7Q9UM01 511 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 OR10H1Q9Y4A9 318 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ADAMTS20P59510 1910 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ADAMTS9Q9P2N4 1935 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 SEC16AO15027 2179 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 SCN2AQ99250 2005 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 TEX51A0A1B0GUA7 166 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 C2orf92A0A1B0GVN3 265 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 A0A1B0GWA3 101 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 PMS2P1A4D2B8 440 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 SAGE2PA6NJ88 616 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 OR6C76A6NM76 312 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 B4E171 279 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 ADAM10O14672 748 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 TSPAN2O60636 221 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 ZNF354AO60765 605 aaPredicted RBP6.76□□□□□ -1.33
SPG11-204ENST00000557866 UTS2O95399 124 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 HBQ1P09105 142 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 ZNF806P0C7X5 589 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 JUNBP17275 347 aaPredicted RBP6.76□□□□□ -1.33
SPG11-204ENST00000557866 POU1F1P28069 291 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 CCKBRP32239 447 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 ETV5P41161 510 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 TSPAN7P41732 249 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 IDH2P48735 452 aaKnown RBP6.76□□□□□ -1.33
SPG11-204ENST00000557866 NR0B1P51843 470 aaKnown RBP6.76□□□□□ -1.33
SPG11-204ENST00000557866 EMP2P54851 167 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 PSMD4P55036 377 aaKnown RBP6.76□□□□□ -1.33
SPG11-204ENST00000557866 GABARAPL2P60520 117 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 CXCR4P61073 352 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 DCAF7P61962 342 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 SLC35A2P78381 396 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 COX10Q12887 443 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 TSPAN31Q12999 210 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 CD226Q15762 336 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 SLX4IPQ5VYV7 408 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 XAF1Q6GPH4 301 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 ACSM5Q6NUN0 579 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 TMEM205Q6UW68 189 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 FAM198BQ6UWH4 519 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 RBM44Q6ZP01 1051 aaKnown RBP6.76□□□□□ -1.33
SPG11-204ENST00000557866 C16orf47Q6ZP98 133 aaPredicted RBP6.76□□□□□ -1.33
SPG11-204ENST00000557866 RANBP3LQ86VV4 465 aaPredicted RBP6.76□□□□□ -1.33
SPG11-204ENST00000557866 NAXDQ8IW45 347 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 NRMQ8IXM6 262 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 LINC00471Q8N535 108 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 ZNF614Q8N883 585 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 APCDD1LQ8NCL9 501 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 FAM71CQ8NEG0 241 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 C7orf57Q8NEG2 295 aa6.76□□□□□ -1.33
SPG11-204ENST00000557866 TOR1AIP2Q8NFQ8 470 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms