RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 GPR68Q15743 365 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 CHI3L2Q15782 390 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 SMU1Q2TAY7 513 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 OR4F3Q6IEY1 312 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 C3orf33Q6P1S2 294 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 PRSS57Q6UWY2 283 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 TFAP2EQ6VUC0 442 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 C16orf62Q7Z3J2 963 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 TUSC5Q8IXB3 177 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 CLECL1Q8IZS7 167 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 OR4A15Q8NGL6 344 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 TMEM171Q8WVE6 324 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 S100PBPQ96BU1 408 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 PLPPR2Q96GM1 343 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 COX4I2Q96KJ9 171 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 SDF2Q99470 211 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 BDH2Q9BUT1 245 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 TMEM109Q9BVC6 243 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 GP6Q9HCN6 339 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 PCDHGB4Q9UN71 923 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 WDR91A4D1P6 747 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 RNASET2O00584 256 aaKnown RBP13.03□□□□□ -0.32
SHMT2-235ENST00000557740 RGS16O15492 202 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-235ENST00000557740 STX11O75558 287 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 HEXAP06865 529 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 MYZAPP0CAP1 466 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 NID1P14543 1247 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 ZNF844Q08AG5 666 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 SKP2Q13309 424 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 ATAD3BQ5T9A4 648 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 WDR93Q6P2C0 686 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
SHMT2-235ENST00000557740 C6orf120Q7Z4R8 191 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 SLC43A2Q8N370 569 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 KISS1RQ969F8 398 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-235ENST00000557740 ARSGQ96EG1 525 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 HDHD5Q9BXW7 423 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 GSX2Q9BZM3 304 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 DPY30Q9C005 99 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 SERHL2Q9H4I8 314 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 CXorf56Q9H5V9 222 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 EXD2Q9NVH0 621 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 KLHL9Q9P2J3 617 aa13.03□□□□□ -0.32
SHMT2-235ENST00000557740 NSD1Q96L73 2696 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-235ENST00000557740 IGHV3-15A0A0B4J1V0 119 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 A0A1W2PNR3 127 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 HS3ST1O14792 307 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 SMAD7O15105 426 aaKnown RBP13.02□□□□□ -0.33
SHMT2-235ENST00000557740 BIRC5O15392 142 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 ITM2AO43736 263 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 GCM2O75603 506 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-235ENST00000557740 NTN1O95631 604 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 AGR2O95994 175 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 CSTAP01040 98 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 YES1P07947 543 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 UBTFL6P0CB48 400 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-235ENST00000557740 PTH2RP49190 550 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 RAC3P60763 192 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 ABCE1P61221 599 aaKnown RBP13.02□□□□□ -0.33
SHMT2-235ENST00000557740 ZNF141Q15928 474 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 SLC25A53Q5H9E4 307 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 KIRREL3Q8IZU9 778 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 GABRG1Q8N1C3 465 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 CLEC4FQ8N1N0 589 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 ZNF619Q8N2I2 560 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 VPS37AQ8NEZ2 397 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 ST8SIA1Q92185 356 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 OR5B2Q96R09 309 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 THUMPD3Q9BV44 507 aaKnown RBP13.02□□□□□ -0.33
SHMT2-235ENST00000557740 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 LAT2Q9GZY6 243 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 OR51I1Q9H343 314 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 AKTIPQ9H8T0 292 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 NGBQ9NPG2 151 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 MKLN1Q9UL63 735 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 RAP2CQ9Y3L5 183 aa13.02□□□□□ -0.33
SHMT2-235ENST00000557740 CENPVL1A0A0U1RR11 272 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TRIM64A6NGJ6 449 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TRIM64BA6NI03 449 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 ETV2O00321 342 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TM9SF1O15321 606 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 CLOCKO15516 846 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TMCC2O75069 709 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 SNUPNO95149 360 aaKnown RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 CPSF4O95639 269 aaKnown RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 PLAUP00749 431 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 PGCP20142 388 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 ENPP1P22413 925 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 KHKP50053 298 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 HPCAP84074 193 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 CAPRIN1Q14444 709 aaKnown RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 P2RY6Q15077 328 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TSC22D1Q15714 1073 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 ARHGAP11BQ3KRB8 267 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TIGD2Q4W5G0 525 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 ANXA8L1Q5VT79 327 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TNFAIP8L2Q6P589 184 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 EIF3MQ7L2H7 374 aaKnown RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 ANKRD46Q86W74 232 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms