RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 BSPH1Q075Z2 132 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 VEZF1Q14119 521 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 PGGHGQ32M88 737 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 NDUFAF6Q330K2 333 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 Q6ZT83 130 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 BHLHA15Q7RTS1 189 aaPredicted RBP14.14□□□□□ -0.15
SCFD1-224ENST00000557713 DDIASQ8IXT1 998 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 C4orf33Q8N1A6 199 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 ATP6V1C2Q8NEY4 427 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 COQ8BQ96D53 544 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 MRGPRX4Q96LA9 322 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 PSD2Q9BQI7 771 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 POTEKPQ9BYX7 375 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 TRIM2Q9C040 744 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 SLCO5A1Q9H2Y9 848 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 PPCSQ9HAB8 311 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 MID2Q9UJV3 735 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 DTNAQ9Y4J8 743 aa14.14□□□□□ -0.15
SCFD1-224ENST00000557713 IGHV3-15A0A0B4J1V0 119 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 A0A1W2PNR3 127 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 SMIM23A6NLE4 172 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 NPHS1O60500 1241 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 EIF4E2O60573 245 aaKnown RBP14.13□□□□□ -0.15
SCFD1-224ENST00000557713 CD8AP01732 235 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 ACVR1BP36896 505 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 OR3A2P47893 321 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 DMTNQ08495 405 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 SELENBP1Q13228 472 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 TP53BP2Q13625 1128 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 XKR7Q5GH72 579 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 ARL13AQ5H913 290 aaPredicted RBP14.13□□□□□ -0.15
SCFD1-224ENST00000557713 NATD1Q8N6N6 113 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 KBTBD8Q8NFY9 601 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 OR56A1Q8NGH5 318 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 OR5W2Q8NH69 310 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 EPS8L3Q8TE67 593 aaKnown RBP14.13□□□□□ -0.15
SCFD1-224ENST00000557713 GTPBP3Q969Y2 492 aaKnown RBP14.13□□□□□ -0.15
SCFD1-224ENST00000557713 PPP3R2Q96LZ3 170 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 L2HGDHQ9H9P8 463 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 KLHL9Q9P2J3 617 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 PRSS50Q9UI38 385 aa14.13□□□□□ -0.15
SCFD1-224ENST00000557713 FAF1Q9UNN5 650 aaPredicted RBP14.13□□□□□ -0.15
SCFD1-224ENST00000557713 COL6A5A8TX70 2615 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 A0A1W2PP18 115 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 SMAD9O15198 467 aaKnown RBP14.12□□□□□ -0.15
SCFD1-224ENST00000557713 ZNF264O43296 627 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 DNAJA2O60884 412 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 PEX11AO75192 247 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 NDUFS7O75251 213 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 C6orf47O95873 294 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 IGHV4-39P01824 125 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 KRT16P08779 473 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 EDNRAP25101 427 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 MAPK1P28482 360 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 ALDH3A1P30838 453 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 PTGR1Q14914 329 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 QPRTQ15274 297 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 LSM12Q3MHD2 195 aaKnown RBP14.12□□□□□ -0.15
SCFD1-224ENST00000557713 EIF1ADQ8N9N8 165 aaKnown RBP14.12□□□□□ -0.15
SCFD1-224ENST00000557713 KIF18AQ8NI77 898 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 SFXN5Q8TD22 340 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 UBLCP1Q8WVY7 318 aaPredicted RBP14.12□□□□□ -0.15
SCFD1-224ENST00000557713 ZNF75CPQ92670 426 aaPredicted RBP14.12□□□□□ -0.15
SCFD1-224ENST00000557713 C3orf30Q96M34 536 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 SDF2Q99470 211 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 TRAF4Q9BUZ4 470 aaPredicted RBP14.12□□□□□ -0.15
SCFD1-224ENST00000557713 GRIP2Q9C0E4 1043 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 ATAD3AQ9NVI7 634 aa14.12□□□□□ -0.15
SCFD1-224ENST00000557713 CISD1Q9NZ45 108 aaKnown RBP14.12□□□□□ -0.15
SCFD1-224ENST00000557713 SHISA9B4DS77 424 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 C9JVG2 144 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 CYTIPO60759 359 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 RAMP1O60894 148 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 LYPLA1O75608 230 aaPredicted RBP14.11□□□□□ -0.15
SCFD1-224ENST00000557713 LYZL6O75951 148 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 H6PDO95479 791 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 FESP07332 822 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 SLC7A1P30825 629 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 RASGEF1BQ0VAM2 473 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 FAPQ12884 760 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 CBFBQ13951 182 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 SPDYE7PQ495Y7 208 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 FREM1Q5H8C1 2179 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 C6orf136Q5SQH8 315 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 RIMKLAQ8IXN7 391 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 KRTCAP2Q8N6L1 136 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 TOR1AIP2Q8NFQ8 470 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 RFWD2Q8NHY2 731 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 ZNF775Q96BV0 537 aaPredicted RBP14.11□□□□□ -0.15
SCFD1-224ENST00000557713 MOAP1Q96BY2 351 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 OR7D2Q96RA2 312 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 EML4Q9HC35 981 aaKnown RBP14.11□□□□□ -0.15
SCFD1-224ENST00000557713 MKS1Q9NXB0 559 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 KCNE5Q9UJ90 142 aa14.11□□□□□ -0.15
SCFD1-224ENST00000557713 GDF2Q9UK05 429 aaPredicted RBP14.11□□□□□ -0.15
SCFD1-224ENST00000557713 CHD3Q12873 2000 aaKnown RBP14.1□□□□□ -0.15
SCFD1-224ENST00000557713 ATRQ13535 2644 aa14.1□□□□□ -0.15
SCFD1-224ENST00000557713 GOLGA8QA0A0J9YX86 632 aa14.1□□□□□ -0.15
SCFD1-224ENST00000557713 GOLGA8OA6NCC3 632 aa14.1□□□□□ -0.15
SCFD1-224ENST00000557713 SERINC4A6NH21 518 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms