RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 PIGHQ14442 188 aaPredicted RBP3.72□□□□□ -1.81
GPHN-215ENST00000557654 KCNJ11Q14654 390 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 C16orf72Q14CZ0 275 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 PSMD6Q15008 389 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 LRRC36Q1X8D7 754 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 PIGGQ5H8A4 983 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 TFDP3Q5H9I0 405 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 ZNF506Q5JVG8 444 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 SPOUT1Q5T280 376 aaKnown RBP3.72□□□□□ -1.81
GPHN-215ENST00000557654 PDPK2PQ6A1A2 396 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 PM20D1Q6GTS8 502 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 SNRNP48Q6IEG0 339 aaKnown RBP3.72□□□□□ -1.81
GPHN-215ENST00000557654 IYDQ6PHW0 289 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 SHQ1Q6PI26 577 aaKnown RBP3.72□□□□□ -1.81
GPHN-215ENST00000557654 C4orf22Q6V702 233 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 FRA10AC1Q70Z53 315 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 TMUB2Q71RG4 321 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 ANKRD46Q86W74 232 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 THNSL1Q8IYQ7 743 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 DEFB107AQ8IZN7 70 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 CENPSQ8N2Z9 138 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 PACRGLQ8N7B6 248 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 TRIML2Q8N7C3 387 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 STARD8Q92502 1023 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 ZNF414Q96IQ9 312 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 CNBD2Q96M20 576 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 ZNF641Q96N77 438 aaPredicted RBP3.72□□□□□ -1.81
GPHN-215ENST00000557654 KLF6Q99612 283 aaPredicted RBP3.72□□□□□ -1.81
GPHN-215ENST00000557654 CTRCQ99895 268 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 EBF4Q9BQW3 602 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 YTHDF1Q9BYJ9 559 aaKnown RBP3.72□□□□□ -1.81
GPHN-215ENST00000557654 ANKRD60Q9BZ19 345 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 SMYD3Q9H7B4 428 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 MRPL40Q9NQ50 206 aaKnown RBP3.72□□□□□ -1.81
GPHN-215ENST00000557654 C8orf4Q9NR00 106 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 CLEC5AQ9NY25 188 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 UBQLN2Q9UHD9 624 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 CCPG1Q9ULG6 757 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 AP4S1Q9Y587 144 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 ITGB4P16144 1822 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 SCN4AP35499 1836 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 KIAA1217Q5T5P2 1943 aa3.72□□□□□ -1.81
GPHN-215ENST00000557654 DOT1LQ8TEK3 1739 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 RGSL1A5PLK6 1076 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 ARHGEF35A5YM69 484 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 TMEM114B3SHH9 223 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 KBTBD13C9JR72 458 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 K7EPI3 171 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 SGK1O00141 431 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 PSMD12O00232 456 aaPredicted RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 KPNA4O00629 521 aaPredicted RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 CTDSPLO15194 276 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 SLC22A1O15245 554 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 AQP9O43315 295 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 PLIN3O60664 434 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 BANF1O75531 89 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 LSM8O95777 96 aaKnown RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 IGHG3P01860 377 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 RLN1P04808 185 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 CALB1P05937 261 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 ALOX5P09917 674 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 ME2P23368 584 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 RPL9P32969 192 aaKnown RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 ELK3P41970 407 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 MAGEA3P43357 314 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 NPBWR1P48145 328 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 SLC1A6P48664 564 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 HNRNPFP52597 415 aaKnown RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 C21orf59P57076 290 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 ATP6V0D1P61421 351 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 FKBP1BP68106 108 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 TSPY1Q01534 308 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 OTUD4Q01804 1114 aaKnown RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 NAB1Q13506 487 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 CEACAM7Q14002 265 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 DPYSL3Q14195 570 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 SPCS2Q15005 226 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 OXA1LQ15070 435 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 SNRNP35Q16560 246 aaKnown RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 RGS21Q2M5E4 152 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 C6orf52Q5T4I8 152 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 STEAP4Q687X5 459 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 SPOPLQ6IQ16 392 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 NANOGP8Q6NSW7 305 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 EPGNQ6UW88 154 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 PGAM4Q8N0Y7 254 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 ANKFN1Q8N957 763 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 UXS1Q8NBZ7 420 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 ZNRF1Q8ND25 227 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 ACTL9Q8TC94 416 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 PNPT1Q8TCS8 783 aaKnown RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 PDCD6IPQ8WUM4 868 aaKnown RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 SEPT8Q92599 483 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 RFT1Q96AA3 541 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 TMIGD2Q96BF3 282 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 C12orf43Q96C57 262 aaKnown RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 ISOC1Q96CN7 298 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 RMND5BQ96G75 393 aaPredicted RBP3.71□□□□□ -1.82
GPHN-215ENST00000557654 ANKRD36BP1Q96IX9 119 aa3.71□□□□□ -1.82
GPHN-215ENST00000557654 RIT2Q99578 217 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms