RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 PRAC2D3DTV9 90 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FAM72CH0Y354 149 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 GAPDHSO14556 408 aaPredicted RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SH2D1BO14796 132 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 WNT9BO14905 357 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ARPC2O15144 300 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 NDUFS7O75251 213 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CRLF1O75462 422 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SCGNO76038 276 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CCNB2O95067 398 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SERPIND1P05546 499 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ALOX5P09917 674 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 UBCP0CG48 685 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 UQCRBP14927 111 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ZNF23P17027 643 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CNR1P21554 472 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 EPHA2P29317 976 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SFTPDP35247 375 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FHITP49789 147 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 HLCSP50747 726 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 EMP2P54851 167 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CDH12P55289 794 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 B3GALT5-AS1P59052 145 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 LMO4P61968 165 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 RPS4XP62701 263 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ERVK-25P63136 954 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 LCN2P80188 198 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 MRPS6P82932 125 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 TAF10Q12962 218 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CEACAM7Q14002 265 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 DGCR6Q14129 220 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 VGLL4Q14135 290 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CTTNQ14247 550 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 GCKRQ14397 625 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 MAPRE2Q15555 327 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 DUOXA1Q1HG43 343 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 GPR33Q49SQ1 333 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CELF3Q5SZQ8 465 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 PDSS1Q5T2R2 415 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FAM72AQ5TYM5 149 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 AGAP7PQ5VUJ5 663 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 MFSD14CQ5VZR4 134 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ADNP2Q6IQ32 1131 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FAM72DQ6L9T8 149 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 C1orf94Q6P1W5 598 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FAM171BQ6P995 826 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 KCTD18Q6PI47 426 aaPredicted RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 DHRS11Q6UWP2 260 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 LINGO4Q6UY18 593 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ZNF562Q6V9R5 426 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 TMEM64Q6YI46 380 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SPATA31D1Q6ZQQ2 1576 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 LRRC74BQ6ZQY2 392 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SLC35D2Q76EJ3 337 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 NIPA1Q7RTP0 329 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ACOT1Q86TX2 421 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 GPBP1Q86WP2 473 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FAM72BQ86X60 149 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 MMAAQ8IVH4 418 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 MAP7D3Q8IWC1 876 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ZNF34Q8IZ26 560 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 PRSS35Q8N3Z0 413 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 C8orf31Q8N9H6 132 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 NOA1Q8NC60 698 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SPATA22Q8NHS9 363 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CAPSLQ8WWF8 208 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SORCS1Q8WY21 1168 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 GTF2H4Q92759 462 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 BADQ92934 168 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 OTULINQ96BN8 352 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 CCDC127Q96BQ5 260 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 DUS3LQ96G46 650 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 AGAP4Q96P64 663 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ZNF385AQ96PM9 386 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 ERGIC2Q96RQ1 377 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 P2RY13Q9BPV8 354 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 TTYH2Q9BSA4 534 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 LRRC1Q9BTT6 524 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 RPP25Q9BUL9 199 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 WDR55Q9H6Y2 383 aaPredicted RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 EBF2Q9HAK2 575 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FKBP14Q9NWM8 211 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 LYARQ9NX58 379 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SLC39A1Q9NY26 324 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 PLEK2Q9NYT0 353 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 RBAKQ9NYW8 714 aaPredicted RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 SIGLEC8Q9NYZ4 499 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 STMN3Q9NZ72 180 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 IL36GQ9NZH8 169 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FLRT3Q9NZU0 649 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 MRM2Q9UI43 246 aaKnown RBP2.89□□□□□ -1.95
FOXN3-217ENST00000557572 NAGKQ9UJ70 344 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FZR1Q9UM11 496 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 PSMD13Q9UNM6 376 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 FLVCR2Q9UPI3 526 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 RNF6Q9Y252 685 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 YIPF1Q9Y548 306 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 COLEC10Q9Y6Z7 277 aa2.89□□□□□ -1.95
FOXN3-217ENST00000557572 PLB1Q6P1J6 1458 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms