RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 BTN3A3O00478 584 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 CLDN4O14493 209 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 XRCC3O43542 346 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 HCRTR1O43613 425 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 TRMUO75648 421 aaKnown RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 TRBC1P01850 177 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 STATHP02808 62 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 SERPINA7P05543 415 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 KRT3P12035 628 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 ICAM2P13598 275 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 CYP11B1P15538 503 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 SYT1P21579 422 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 CA4P22748 312 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 SYKP43405 635 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 DEFA6Q01524 100 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 PLGLB1Q02325 96 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 TFF3Q07654 80 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 ACTN3Q08043 901 aaPredicted RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 MESDQ14696 234 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 PCLAFQ15004 111 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 SLC1A5Q15758 541 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 MEA1Q16626 185 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 ZNF789Q5FWF6 425 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 FFAR4Q5NUL3 377 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 ELFN2Q5R3F8 820 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 GPRC6AQ5T6X5 926 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 RESP18Q5W5W9 173 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 FAM205BPQ63HN1 556 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 SLC25A25Q6KCM7 469 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 DCUN1D2Q6PH85 259 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 FIP1L1Q6UN15 594 aaKnown RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 KDELC1Q6UW63 502 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 ENOSF1Q7L5Y1 443 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 NLRP9Q7RTR0 991 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 SLC16A9Q7RTY1 509 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 NT5DC3Q86UY8 548 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 MYPOPQ86VE0 399 aaPredicted RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 AMIGO1Q86WK6 493 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 UMODL1-AS1Q8N2C9 162 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 RAB42Q8N4Z0 105 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 ZNF383Q8NA42 475 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 TTC29Q8NA56 475 aaPredicted RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 JOSD2Q8TAC2 188 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 FAM57AQ8TBR7 257 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 PHLDA1Q8WV24 401 aaPredicted RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 PIH1D2Q8WWB5 315 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 HPSE2Q8WWQ2 592 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 METTL21AQ8WXB1 218 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 LPGAT1Q92604 370 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 NT5C3BQ969T7 300 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD8-212ENST00000557329 SPACA9Q96E40 222 aaPredicted RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 PSKH2Q96QS6 385 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 C11orf70Q9BRQ4 267 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 TUBGCP2Q9BSJ2 902 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 ZSCAN5AQ9BUG6 496 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 TRIM15Q9C019 465 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 LAT2Q9GZY6 243 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 LRRC19Q9H756 370 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 PDFQ9HBH1 243 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD8-212ENST00000557329 SDR39U1Q9NRG7 319 aaPredicted RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 CUTCQ9NTM9 273 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 RHCGQ9UBD6 479 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 TRPC4Q9UBN4 977 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 ZNF282Q9UDV7 671 aaPredicted RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 SLC24A2Q9UI40 661 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 DNAJC12Q9UKB3 198 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 MAN1B1Q9UKM7 699 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 POMT2Q9UKY4 750 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 DNPEPQ9ULA0 475 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 EIF3LQ9Y262 564 aaKnown RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 MRPS28Q9Y2Q9 187 aaKnown RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 SNX8Q9Y5X2 465 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 NCOA6Q14686 2063 aaPredicted RBP3.27□□□□□ -1.89
CHD8-212ENST00000557329 IGLV7-46A0A075B6I9 117 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 LOC102723996A0A087X1L8 192 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 A0A0J9YWU9 116 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 A0A1B0GX78 115 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 ANKRD61A6NGH8 418 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 P4HA2O15460 535 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 ZNF500O60304 480 aaPredicted RBP3.26□□□□□ -1.89
CHD8-212ENST00000557329 UGT1A9O60656 530 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 KHDRBS3O75525 346 aaKnown RBP3.26□□□□□ -1.89
CHD8-212ENST00000557329 ERAL1O75616 437 aaKnown RBP3.26□□□□□ -1.89
CHD8-212ENST00000557329 CDC123O75794 336 aaPredicted RBP3.26□□□□□ -1.89
CHD8-212ENST00000557329 ANXA5P08758 320 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 ACP2P11117 423 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 PFKFB1P16118 471 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 ERCC2P18074 760 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 UGT1A6P19224 532 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 HSPA9P38646 679 aaKnown RBP3.26□□□□□ -1.89
CHD8-212ENST00000557329 TNNT3P45378 269 aaPredicted RBP3.26□□□□□ -1.89
CHD8-212ENST00000557329 VSX2P58304 361 aaPredicted RBP3.26□□□□□ -1.89
CHD8-212ENST00000557329 HSPB3Q12988 150 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 VEZF1Q14119 521 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 P2RY6Q15077 328 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 SLC5A12Q1EHB4 618 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 ODF4Q2M2E3 257 aa3.26□□□□□ -1.89
CHD8-212ENST00000557329 C14orf177Q52M58 125 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 648.7 ms