RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 OR6T1Q8NGN1 323 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 OR14L1PQ8NHC6 308 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 VANGL1Q8TAA9 524 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-227ENST00000557269 CPT1CQ8TCG5 803 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 PTGES2Q9H7Z7 377 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 ACKR4Q9NPB9 350 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 DCAF13Q9NV06 445 aaKnown RBP11.62□□□□□ -0.55
SHMT2-227ENST00000557269 QPCTLQ9NXS2 382 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 TAS2R10Q9NYW0 307 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 ACTR3BQ9P1U1 418 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 SPRR3Q9UBC9 169 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 TNFRSF10DQ9UBN6 386 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 SLC7A8Q9UHI5 535 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 MAGEL2Q9UJ55 1249 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 DKKL1Q9UK85 242 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 SLC6A5Q9Y345 797 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 SH3GLB1Q9Y371 365 aa11.62□□□□□ -0.55
SHMT2-227ENST00000557269 MRPS18CQ9Y3D5 142 aaKnown RBP11.62□□□□□ -0.55
SHMT2-227ENST00000557269 HEATR5AQ86XA9 2040 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 TCRBV5S2A0A599 114 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 SYT5O00445 386 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 EFNA2O43921 213 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 SEMA7AO75326 666 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 PRKD3O94806 890 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 NTN1O95631 604 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 IGHG3P01860 377 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 C8BP07358 591 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 PRKCAP17252 672 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 IL11P20809 199 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 PSMA4P25789 261 aaKnown RBP11.61□□□□□ -0.55
SHMT2-227ENST00000557269 IDH2P48735 452 aaKnown RBP11.61□□□□□ -0.55
SHMT2-227ENST00000557269 SESN3P58005 492 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 FOXF1Q12946 379 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 ZSCAN26Q16670 478 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 ZSWIM7Q19AV6 140 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 TRILQ7L0X0 811 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 TSEN54Q7Z6J9 526 aaKnown RBP11.61□□□□□ -0.55
SHMT2-227ENST00000557269 YTHDF3Q7Z739 585 aaKnown RBP11.61□□□□□ -0.55
SHMT2-227ENST00000557269 BHLHE22Q8NFJ8 381 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-227ENST00000557269 MCUR1Q96AQ8 359 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 ASB9Q96DX5 294 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 HSH2DQ96JZ2 352 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 GPR137Q96N19 417 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 ARMC7Q9H6L4 198 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 POMPQ9Y244 141 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 V9GYQ6 96 aa11.61□□□□□ -0.55
SHMT2-227ENST00000557269 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 TRGV5A0A0B4J1U4 118 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 A0A1B0GTH9 108 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 A0A1B0GVC2 190 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 B8ZZF3 427 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 GMNNO75496 209 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 PGCP20142 388 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 SLC6A8P48029 635 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 STARP49675 285 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 ZNF41P51814 821 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-227ENST00000557269 GFRA1P56159 465 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 RGS8P57771 180 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-227ENST00000557269 TRAP1Q12931 704 aaKnown RBP11.6□□□□□ -0.55
SHMT2-227ENST00000557269 ELOAQ14241 798 aaKnown RBP11.6□□□□□ -0.55
SHMT2-227ENST00000557269 GANABQ14697 944 aaKnown RBP11.6□□□□□ -0.55
SHMT2-227ENST00000557269 DCST1Q5T197 706 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 LCN8Q6JVE9 175 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 ZNF550Q7Z398 422 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 CARM1Q86X55 608 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 DHFR2Q86XF0 187 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 ZNF440Q8IYI8 595 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 NEIL3Q8TAT5 605 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 RASSF5Q8WWW0 418 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 PROX1Q92786 737 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 RELTQ969Z4 430 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 NSMCE2Q96MF7 247 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 RNF145Q96MT1 663 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 HHATLQ9HCP6 504 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 CTPS2Q9NRF8 586 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 AGPAT4Q9NRZ5 378 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 ACER3Q9NUN7 267 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 SLC13A4Q9UKG4 626 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 BAG5Q9UL15 447 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 ZNF337Q9Y3M9 751 aa11.6□□□□□ -0.55
SHMT2-227ENST00000557269 A0A087WZY1 265 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 OR2M5A3KFT3 312 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 C7orf72A4D263 438 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 ETV2O00321 342 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-227ENST00000557269 FAAHO00519 579 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 OPN1LWP04000 364 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 THY1P04216 161 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 SEMG1P04279 462 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 BMP7P18075 431 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 FUT4P22083 530 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 ERFP50548 548 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 IGFBP7Q16270 282 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 GLYR1Q49A26 553 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-227ENST00000557269 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 SLC25A53Q5H9E4 307 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 RAET1LQ5VY80 246 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 FKBP9P1Q75LS8 142 aa11.59□□□□□ -0.55
SHMT2-227ENST00000557269 EID3Q8N140 333 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms