RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 PAMR1Q6UXH9 720 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 ESPNLQ6ZVH7 1005 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 FAM214BQ7L5A3 538 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 GTF2IRD2Q86UP8 949 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 GTPBP8Q8N3Z3 284 aaPredicted RBP6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 ZNF614Q8N883 585 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 VPS37AQ8NEZ2 397 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 SFXN5Q8TD22 340 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 MGARPQ8TDB4 240 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 CDS1Q92903 461 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 GMPPAQ96IJ6 420 aaPredicted RBP6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 C3orf30Q96M34 536 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 RNF145Q96MT1 663 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 ALPK1Q96QP1 1244 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 MED18Q9BUE0 208 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 DUSP26Q9BV47 211 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 OPN3Q9H1Y3 402 aaPredicted RBP6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 CXXC4Q9H2H0 198 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 LIME1Q9H400 295 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 CXorf36Q9H7Y0 433 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 RNF122Q9H9V4 155 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 TIGARQ9NQ88 270 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 GLRX2Q9NS18 164 aa6.91□□□□□ -1.3
HNRNPC-226ENST00000556628 C7orf72A4D263 438 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 GJE1A6NN92 205 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 C16orf97H3BN30 126 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 BIRC5O15392 142 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 CXCL13O43927 109 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 FBXO24O75426 580 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 AK1P00568 194 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 HRGP04196 525 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 PABPC4LP0CB38 370 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 G6PDP11413 515 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 EPHA1P21709 976 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 MATN1P21941 496 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 EIF1P41567 113 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ETV4P43268 484 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 KIR2DL2P43627 348 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 SLC1A6P48664 564 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ATP12AP54707 1039 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 SUMO3P55854 103 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 CLDN8P56748 225 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ABCE1P61221 599 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 CHI3L2Q15782 390 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 PDCD2Q16342 344 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 EXOC3L2Q2M3D2 409 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 TMEM44Q2T9K0 475 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 DEFB113Q30KQ7 82 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 PLPPR5Q32ZL2 321 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 HBMQ6B0K9 141 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ZNF474Q6S9Z5 364 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ZAR1Q86SH2 424 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 GGNQ86UU5 652 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 STK32CQ86UX6 486 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 TGIF2LYQ8IUE0 185 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 KRTCAP2Q8N6L1 136 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 TMCO5AQ8N6Q1 288 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ZNF781Q8N8C0 355 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ANKS4BQ8N8V4 417 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ZNF610Q8N9Z0 462 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 TOR1AIP2Q8NFQ8 470 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 OR6K3Q8NGY3 331 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 OR10D3Q8NH80 312 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 OR5AK3PQ8NH89 298 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 OR2V1Q8NHB1 315 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 RFWD2Q8NHY2 731 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 PSMA8Q8TAA3 256 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 LRRC8CQ8TDW0 803 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 COQ8BQ96D53 544 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 MBD6Q96DN6 1003 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 SLC35G5Q96KT7 338 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 PPP1R36Q96LQ0 422 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 KLHL15Q96M94 604 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 OR7D2Q96RA2 312 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 PAIP2Q9BPZ3 127 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 DPY30Q9C005 99 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 KLHL4Q9C0H6 718 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 MED17Q9NVC6 651 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 EXD2Q9NVH0 621 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 FBXO34Q9NWN3 711 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 KLHL28Q9NXS3 571 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 ASIC5Q9NY37 505 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 RAP2CQ9Y3L5 183 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 TESMINQ9Y4I5 508 aa6.9□□□□□ -1.3
HNRNPC-226ENST00000556628 MPDZO75970 2070 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 NPIPA5A0A0B4J1W7 369 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 RNF103-CHMP3A0A140T963 221 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 NPIPA7E9PJI5 369 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 RNASET2O00584 256 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 TNFSF11O14788 317 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 ZNF264O43296 627 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 ITM2AO43736 263 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 EIF4E2O60573 245 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 AQP8O94778 261 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 ATE1O95260 518 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 AGR2O95994 175 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 CGAP01215 116 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 OPN1LWP04000 364 aa6.89□□□□□ -1.31
HNRNPC-226ENST00000556628 DHRS4L1P0CG22 281 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms